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唇裂伴或不伴腭裂的双胞胎不一致性的拷贝数变异分析。

Copy number variation analysis of twin pairs discordant for cleft lip with or without cleft palate.

机构信息

Department of Experimental, Diagnostic and Specialty Medicine, University of Bologna, Bologna, Italy.

Department of Morphology, Surgery and Experimental Medicine, University of Ferrara, Ferrara, Italy.

出版信息

Int J Immunopathol Pharmacol. 2019 Jan-Dec;33:2058738419855873. doi: 10.1177/2058738419855873.

DOI:10.1177/2058738419855873
PMID:31663445
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6822181/
Abstract

Non-syndromic cleft lip with or without cleft palate (nsCL/P) is a frequent orofacial malformation. The comparison of concordance rate observed in monozygotic and dizygotic twins supports high level of heritability and a strong genetic component. However, phenotype concordance for orofacial cleft in monozygotic twins is about 50%. The aim of the present investigation was to detect postzygotic events that may account for discordance in monozygotic twins. High-density SNP microarrays hybridization was used to genotype two pairs of monozygotic twins discordant for nsCL/P. Discordant SNP genotypes and copy number variants were analyzed to identify genetic differences responsible of phenotype discrepancy. A number of differences were observed, none involving known nsCL/P candidate genes or genomic regions. Considering the limitation of the study, related to the small sample size and to the large-scale investigation method, the results suggest that the detection of discordant events in other monozygotic twin pairs would be remarkable and warrant further investigations.

摘要

非综合征性唇裂伴或不伴腭裂(nsCL/P)是一种常见的口腔面裂畸形。同卵双生子和异卵双生子的一致性率比较支持高遗传率和强遗传因素。然而,同卵双生子的口腔面裂表型一致性约为 50%。本研究旨在检测可能导致同卵双生子不一致的合子后事件。使用高密度 SNP 微阵列杂交对 2 对非综合征性唇裂伴或不伴腭裂的同卵双生子进行基因分型。分析不一致的 SNP 基因型和拷贝数变异,以确定导致表型差异的遗传差异。观察到一些差异,但都不涉及已知的 nsCL/P 候选基因或基因组区域。考虑到研究的局限性,包括样本量小和大样本调查方法,结果表明,在其他同卵双生子中检测到不一致事件将是显著的,并需要进一步研究。

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本文引用的文献

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Oral Dis. 2018 Oct;24(7):1303-1309. doi: 10.1111/odi.12910. Epub 2018 Jul 10.
2
Possible effect of SNAIL family transcriptional repressor 1 polymorphisms in non-syndromic cleft lip with or without cleft palate.SNAIL 家族转录阻遏因子 1 多态性对非综合征型唇裂伴或不伴腭裂的可能影响。
Clin Oral Investig. 2018 Sep;22(7):2535-2541. doi: 10.1007/s00784-018-2350-0. Epub 2018 Jan 27.
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New insights into the generation and role of de novo mutations in health and disease.关于新生突变在健康与疾病中的产生及其作用的新见解。
Genome Biol. 2016 Nov 28;17(1):241. doi: 10.1186/s13059-016-1110-1.
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Biological relevance of CNV calling methods using familial relatedness including monozygotic twins.使用包括同卵双胞胎在内的家族相关性来调用 CNV 的生物学相关性方法。
BMC Bioinformatics. 2014 Apr 21;15:114. doi: 10.1186/1471-2105-15-114.
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Classification, epidemiology, and genetics of orofacial clefts.口面部裂隙的分类、流行病学及遗传学
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6
Continuing difficulties in interpreting CNV data: lessons from a genome-wide CNV association study of Australian HNPCC/lynch syndrome patients.解读 CNV 数据的持续困难:一项澳大利亚 HNPCC/林奇综合征患者全基因组 CNV 关联研究的经验教训。
BMC Med Genomics. 2013 Mar 26;6:10. doi: 10.1186/1755-8794-6-10.
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Epidemiology of oral clefts 2012: an international perspective.2012年口腔颌面部裂隙的流行病学:国际视角
Front Oral Biol. 2012;16:1-18. doi: 10.1159/000337464. Epub 2012 Jun 25.
8
500K SNP array analyses in blood and saliva showed no differences in a pair of monozygotic twins discordant for cleft lip.对一对唇裂不一致的同卵双胞胎的血液和唾液进行的500K单核苷酸多态性阵列分析显示无差异。
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9
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Cleft Palate Craniofac J. 2011 Jan;48(1):66-81. doi: 10.1597/09-217. Epub 2010 Apr 6.
10
Search for genomic alterations in monozygotic twins discordant for cleft lip and/or palate.在唇腭裂不一致的单卵双胞胎中寻找基因组改变。
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