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sp. nov.,一种新型内生放线菌,分离自 L 的树皮。

sp. nov., a novel endophytic actinobacterium isolated from bark of L.

机构信息

Research Center for Medicine & Biology, Zunyi Medical University, Zunyi 563006, PR China.

Guizhou Provincial College-based Key Lab for Tumor Prevention and Treatment with Distinctive Medicines, Zunyi Medical University, Zunyi 563006, PR China.

出版信息

Int J Syst Evol Microbiol. 2020 Jan;70(1):693-699. doi: 10.1099/ijsem.0.003822.

Abstract

A Gram-staining-positive, aerobic, rod-shaped, non-spore-forming actinobacterium, designated strain M2KJ-4, was isolated from a surface-sterilized bark of L. collected from Xinpu in Guizhou, PR China and characterized using a polyphasic approach to determine its taxonomic position. M2KJ-4 grew optimally with 1 % (w/v) NaCl at 25 °C and pH 8.0. Substrate mycelia and aerial mycelia were not formed, and no diffusible pigments were observed on the media tested. Phylogenetic analysis based on 16S rRNA gene sequence indicated that M2KJ-4represented a member of the genus and shared the highest 16S rRNA gene sequence similarity with DSM 10552 (Z78209) (98.95 %). The DNA GC content of M2KJ-4 was 70.6 mol%. The average nucleotide identity value and estimated DDH value between M2KJ-4 and the type strain of were 86.1 % and 30.2 %, respectively. The cell-wall peptidoglycan contained ll-diaminopimelic acid and MK-9(H) was the predominant menaquinone. The predominant polar lipids were diphosphatidylglycerol, phosphatidylglycerol, unidentified phospholipids and unidentified lipids. The major fatty acids were C, 10-methyl C, C 2-OH and Cω9. On the basis of the results from phylogenetic, phenotypic and chemotaxonomic analysis, strain M2KJ-4 represents a novel species of the genus , for which the name sp. nov. is proposed. The type strain is M2KJ-4 (=KCTC 49174=CGMCC 1.13666).

摘要

一株革兰氏阳性、需氧、杆状、不产芽孢的放线菌,被命名为 M2KJ-4 菌株,从中国贵州新浦采集的经表面消毒的 L.树皮中分离得到,并采用多相分类法对其进行了特征描述,以确定其分类地位。M2KJ-4 在 1%(w/v)NaCl、25°C 和 pH8.0 的条件下生长最佳。不形成基质菌丝和气生菌丝,在测试的培养基上也没有观察到可扩散色素。基于 16S rRNA 基因序列的系统发育分析表明,M2KJ-4 代表 属的一个成员,与 DSM 10552(Z78209)(98.95%)的 16S rRNA 基因序列相似度最高。M2KJ-4 的 DNA G+C 含量为 70.6mol%。M2KJ-4 与 模式株的平均核苷酸同一性值和估计的 DDH 值分别为 86.1%和 30.2%。细胞壁肽聚糖含有 ll-二氨基庚二酸,MK-9(H)是主要的menaquinone。主要的极性脂是双磷脂酰甘油、磷脂酰甘油、未鉴定的磷脂和未鉴定的脂类。主要脂肪酸是 C、10-甲基 C、C 2-OH 和 Cω9。基于系统发育、表型和化学分类学分析的结果,菌株 M2KJ-4 代表 属的一个新种,建议将其命名为 sp. nov.。模式株为 M2KJ-4(=KCTC 49174=CGMCC 1.13666)。

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