Sun Ye, Liu Wei-Hong, Ai Meng-Jie, Su Jing, Yu Li-Yan, Zhang Yu-Qin
1Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100050, PR China.
2Yunnan Provincial Key Laboratory of Entomological Biopharmaceutical R&D, Dali University, Dali 671003, PR China.
Int J Syst Evol Microbiol. 2019 Feb;69(2):460-464. doi: 10.1099/ijsem.0.003181. Epub 2018 Dec 17.
An actinobacterial strain, designated CPCC 204604, was isolated from a water sample collected from Sancha Lake, a drinking-water reservoir in Sichuan Province, south-west China. Cells were strictly aerobic, Gram-stain-positive, non-spore-forming and non-motile. Polyphasic taxonomic analysis indicated that galactose and ribose were detected as the diagnostic sugars in the whole-cell hydrolysates, and ll-diaminopimelic acid was the diagnostic diamino acid in cell-wall peptidoglycan. MK-9(H4) was the predominant menaquinone. The phospholipids consisted of diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol and an unidentified phospholipid. The major fatty acids were C16 : 0, C16 : 0 2-OH, C18 : 1ω9c, C18 : 0 and 10-methyl C18:0. The genomic DNA G+C content was 71.2 mol%. In the phylogenetic tree based on 16S rRNA gene sequences, strain CPCC 204604 formed a distinct clade with Aeromicrobium ponti DSM 19178 within the lineage of the genus Aeromicrobium, with the highest 16S rRNA gene sequence similarity of 98.3 % to its closest neighbour. On the basis of the genotypic and phenotypic data, we conclude that strain CPCC 204604 represents a novel species of the genus Aeromicrobium, for which the name Aeromicrobiumlacus sp. nov. is proposed with strain CPCC 204604 (=NBRC 112936=DSM 105424) as the type strain.
从中国西南部四川省饮用水水源三cha湖采集的水样中分离出一株放线菌,命名为CPCC 204604。细胞严格需氧,革兰氏染色阳性,不产芽孢,无运动性。多相分类分析表明,全细胞水解物中检测到半乳糖和核糖为特征性糖类,细胞壁肽聚糖中的特征性二氨基酸为ll-二氨基庚二酸。MK-9(H4)是主要的甲基萘醌。磷脂由双磷脂酰甘油、磷脂酰甘油、磷脂酰肌醇和一种未鉴定的磷脂组成。主要脂肪酸为C16 : 0、C16 : 0 2-OH、C18 : 1ω9c、C18 : 0和10-甲基C18:0。基因组DNA G+C含量为71.2 mol%。在基于16S rRNA基因序列的系统发育树中,菌株CPCC 204604在嗜微杆菌属谱系中与嗜微杆菌DSM 19178形成一个独特的分支,与其最接近的邻居的16S rRNA基因序列相似性最高为98.3 %。基于基因型和表型数据,我们得出结论,菌株CPCC 204604代表嗜微杆菌属的一个新物种,为此提出名为嗜微杆菌lacus sp. nov. 的新物种,菌株CPCC 204604(=NBRC 112936=DSM 105424)为模式菌株。