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一对患有听力损失的中国夫妇中的一种新型变异。

A novel variant in a Chinese couple with hearing loss.

作者信息

Zhang Chuan, Hao Shengju, Liu Yali, Zhou Bingbo, Liu Furong, Zheng Lei, Ma Panpan, Liu Qing, Lin Xiaojuan, Yan Yousheng, Zhang Qinghua

机构信息

Gansu Provincial Maternal and Child Health Care Hospital, Gansu Provincial Key Laboratory of Birth Defects Prevention and Control, Lanzhou, Gansu, China.

National Research Institute for Family Planning, Beijing, China.

出版信息

J Int Med Res. 2019 Dec;47(12):6082-6090. doi: 10.1177/0300060519884197. Epub 2019 Nov 10.

DOI:10.1177/0300060519884197
PMID:31709873
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7045666/
Abstract

OBJECTIVE

To perform molecular diagnosis and genetic counseling in a young Chinese couple with congenital hearing loss.

METHODS

Variant screening analysis was performed by PCR and direct Sanger sequencing or targeted next-generation sequencing of all known hearing loss genes. Novel variants were evaluated by PolyPhen2 and PROVEAN software tools to evaluate possible effects on protein function.

RESULTS

We identified causative variants in the young couple: c.235delC (rs80338943)/c.299-300delAT (rs111033204) compound heterozygous variants of in the husband and c.1828G>A (p.Glu610Lys, rs535637788)/c.2825-2827delAGA compound heterozygous variants of in the wife. The c.1828G>A variant has only previously been reported in a Mexican-American individual in the 1000 Genomes Project database. Using PolyPhen2 and PROVEAN, we speculated that the variant c.1828G>A is potentially pathogenic.

CONCLUSION

We carried out molecular diagnosis in a young couple with congenital hearing loss, and identified different disease-causing genes in the two individuals. The variant c.1828G>A present in the wife had not previously been reported in individuals with congenital hearing loss. We determined this to be a potential pathogenic variant, and a novel variant associated with hearing loss in a Chinese individual.

摘要

目的

对一对患有先天性听力损失的年轻中国夫妇进行分子诊断和遗传咨询。

方法

采用聚合酶链反应(PCR)和直接桑格测序法或对所有已知听力损失基因进行靶向二代测序,进行变异筛查分析。通过PolyPhen2和PROVEAN软件工具评估新变异对蛋白质功能的可能影响。

结果

我们在这对年轻夫妇中鉴定出致病变异:丈夫为c.235delC(rs80338943)/c.299 - 300delAT(rs111033204)复合杂合变异,妻子为c.1828G>A(p.Glu610Lys,rs535637788)/c.2825 - 2827delAGA复合杂合变异。c.1828G>A变异此前仅在千人基因组计划数据库中的一名墨西哥裔美国人中报道过。使用PolyPhen2和PROVEAN,我们推测c.1828G>A变异具有潜在致病性。

结论

我们对一对患有先天性听力损失的年轻夫妇进行了分子诊断,在两人中鉴定出不同的致病基因。妻子中存在的c.1828G>A变异此前在先天性听力损失个体中未见报道。我们确定其为潜在致病变异,是与一名中国个体听力损失相关的新变异。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3ab/7045666/55e1280c79c4/10.1177_0300060519884197-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3ab/7045666/900dec92bd7a/10.1177_0300060519884197-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3ab/7045666/55e1280c79c4/10.1177_0300060519884197-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3ab/7045666/900dec92bd7a/10.1177_0300060519884197-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f3ab/7045666/55e1280c79c4/10.1177_0300060519884197-fig2.jpg

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Neural Plast. 2018 Jul 5;2018:4920980. doi: 10.1155/2018/4920980. eCollection 2018.
2
Further audiovestibular characterization of DFNB77, caused by deleterious variants in LOXHD1, and investigation into the involvement of Fuchs corneal dystrophy.进一步对由 LOXHD1 中的有害变异引起的 DFNB77 进行听觉前庭特征描述,并研究 Fuchs 角膜营养不良的参与情况。
Clin Genet. 2018 Aug;94(2):221-231. doi: 10.1111/cge.13368. Epub 2018 Jun 8.
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BMC Med Genomics. 2021 Jun 30;14(1):175. doi: 10.1186/s12920-021-01027-5.
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Missense variant in LOXHD1 is associated with canine nonsyndromic hearing loss.LOXHD1 中的错义变异与犬非综合征性听力损失有关。
Hum Genet. 2021 Nov;140(11):1611-1618. doi: 10.1007/s00439-021-02286-z. Epub 2021 May 13.
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Mutation analysis of TCOF1 gene in Chinese Treacher Collins syndrome patients.中国特雷彻·柯林斯综合征患者 TCOF1 基因突变分析。
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Mutation analysis, treatment and prenatal diagnosis of Chinese cases of methylmalonic acidemia.中国甲基丙二酸血症病例的突变分析、治疗和产前诊断。
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