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定量研究脂质膜过冷上方水的动力学非均匀性的时空尺度。

Quantification of spatio-temporal scales of dynamical heterogeneity of water near lipid membranes above supercooling.

机构信息

Department of Chemistry, Indian Institute of Technology Jodhpur, Jodhpur 342037, India.

出版信息

Soft Matter. 2019 Dec 4;15(47):9805-9815. doi: 10.1039/c9sm01725a.

DOI:10.1039/c9sm01725a
PMID:31746927
Abstract

A hydrated 1,2-dimyristoyl-sn-glycero-3-phosphorylcholine (DMPC) lipid membrane is investigated using an all atom molecular dynamics simulation at 308 K to determine the physical sources of universal slow relaxations of hydration layers and length-scale of the spatially heterogeneous dynamics. Continuously residing interface water (IW) molecules hydrogen bonded to different moieties of lipid heads in the membrane are identified. The non-Gaussian parameters of all classes of IW molecules show a cross-over from cage vibration to translational diffusion. A significant non-Gaussianity is observed for the IW molecules exhibiting large length correlations in translational van Hove functions. Two time-scales for the ballistic motions and hopping transitions are obtained from the self intermediate scattering functions of the IW molecules with an additional long relaxation, which disappears for bulk water. The long relaxation time-scales for the IW molecules obtained from the self intermediate scattering functions are in good accordance with the hydrogen bond relaxation time-scales irrespective of the nature of the chemical confinement and the confinement lifetime. Employing a block analysis approach, the length-scale of dynamical heterogeneities is captured from a transition from non-Gaussianity to Gaussianity in van Hove correlation functions of the IW molecules. The heterogeneity length-scale is comparable to the wave-length of the small and weak undulations of the membrane calculated by Fourier transforms of lipid tilts. This opens up a new avenue towards a possible correlation between heterogeneity length-scale and membrane curvature more significant for rippled membranes. Thus, our analyses provide a measure towards the spatio-temporal scale of dynamical heterogeneity of confined water near membranes.

摘要

在 308 K 下使用全原子分子动力学模拟研究水合 1,2-二肉豆蔻酰-sn-甘油-3-磷酸胆碱 (DMPC) 脂质膜,以确定水合层普遍缓慢弛豫的物理来源和空间异质动力学的长度尺度。确定了连续存在于膜中脂质头部不同部分的氢键合界面水 (IW) 分子。所有 IW 分子类别的非高斯参数均从笼振动转变为平移扩散。在平移 van Hove 函数中表现出大长度相关性的 IW 分子中观察到显著的非高斯性。通过 IW 分子的自中间散射函数获得了弹道运动和跳跃跃迁的两个时间标度,对于体相水,该时间标度存在额外的长弛豫。从自中间散射函数获得的 IW 分子的长弛豫时间标度与氢键弛豫时间标度非常吻合,而与化学约束的性质和约束寿命无关。采用块分析方法,从 IW 分子的 van Hove 相关函数中的非高斯性到高斯性的转变中捕捉到动力学异质性的长度尺度。异质性长度尺度与由脂质倾斜傅里叶变换计算的膜小而弱波动的波长相当。这为波纹膜中异质性长度尺度与膜曲率之间可能存在的相关性开辟了一条新途径。因此,我们的分析为研究膜附近受限水的动态异质性的时空尺度提供了一种方法。

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