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A novel standardized deep sequencing-based assay for hepatitis C virus genotype determination.一种新型基于高通量测序的丙型肝炎病毒基因型检测标准化方法。
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3
Sequencing of hepatitis C virus for detection of resistance to direct-acting antiviral therapy: A systematic review.丙型肝炎病毒测序用于检测对直接抗病毒治疗的耐药性:一项系统评价。
Hepatol Commun. 2017 May 22;1(5):379-390. doi: 10.1002/hep4.1050. eCollection 2017 Jul.
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Hepatitis C Virus: Viral Quasispecies and Genotypes.丙型肝炎病毒:病毒准种和基因型。
Int J Mol Sci. 2017 Dec 22;19(1):23. doi: 10.3390/ijms19010023.
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Global prevalence and genotype distribution of hepatitis C virus infection in 2015: a modelling study.2015 年全球丙型肝炎病毒感染的流行率和基因型分布:一项建模研究。
Lancet Gastroenterol Hepatol. 2017 Mar;2(3):161-176. doi: 10.1016/S2468-1253(16)30181-9. Epub 2016 Dec 16.
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8
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9
First international external quality assessment for hepatitis delta virus RNA quantification in plasma.首个用于检测血浆中乙型肝炎病毒 RNA 含量的国际外部质量评估
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2015 - 2016年期间MOTAKK丙型肝炎病毒RNA基因分型和丁型肝炎病毒外部质量评估项目结果评估

Evaluation of the results of MOTAKK hepatitis C virus RNA genotyping and hepatitis delta virus external quality assessment programs during 2015-2016.

作者信息

Karataylı Ersin, Soydemir Ege, Aksoy Zeynep Büşra, Kızılpınar Mehtap, Altay Koçak Aylin, Karataylı Senem Ceren, Yurdcu Esra, Yıldırım Umut, Güriz Haluk, Bozdayı Gülendam, Yurdaydın Cihan, İlhan Osman, Yıldırım Yasin, Hdv Study Group Motakk Hcv Genotype And, Bozdayı A Mithat

机构信息

Hepatology Institute, Ankara University, Ankara, Turkey.

Biotechnology Institute, Ankara University, Ankara, Turkey.

出版信息

Turk J Gastroenterol. 2019 Nov;30(11):957-963. doi: 10.5152/tjg.2019.18859.

DOI:10.5152/tjg.2019.18859
PMID:31767550
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6883996/
Abstract

BACKGROUND/AIMS: To evaluate the HCV RNA genotyping and HDV RNA tests that are performed in molecular microbiology laboratories in Turkey as part of a national external quality assessment programme, MOTAKK (Moleküler Tanıda Kalite Kontrol) (English translation: Quality control in molecular diagnostics).

MATERIALS AND METHODS

Plasmas having different HCV RNA genotypes were used to prepare HCV genotype control sera. The HDV RNA main stock was prepared from patients with chronic delta hepatitis who had a significant amount of viral load detected, as per the WHO reference materials on viral load studies that were compiled for the purpose of developing HDV RNA control sera. Samples with different viral loads were prepared from this main stock by dilution. The prepared controls were delivered to the registered laboratories. The laboratories carried out the relevant tests and entered their results via the MOTAKK web page. External quality assessment (EQA) reports of the participants were uploaded to the website as well.

RESULTS

In total, there were 23 participating laboratories, out of which 20 exclusively performed HCV genotyping, and 15 and 16 only performed HDV RNA in 2015 and 2016, respectively. The success rate of the results of the HCV genotype was 56-96% in 2015 and 30-95% in 2016. The tube with a 30% success rate had a recombinant type of HCV, therefore, it could not be detected in most of the laboratories. The HDV RNA results were evaluated qualitatively. Accordingly, HDV RNA detection rates of participant laboratories were 71-100% in 2015 and 50-100% in 2016.

CONCLUSION

This study was the first national external quality control program in Turkey regarding HCV RNA genotyping and HDV RNA in the field of molecular microbiology, and it was implemented successfully.

摘要

背景/目的:在土耳其,作为全国性外部质量评估计划MOTAKK(分子诊断质量控制)的一部分,对分子微生物实验室开展的丙型肝炎病毒(HCV)RNA基因分型和丁型肝炎病毒(HDV)RNA检测进行评估。

材料与方法

使用具有不同HCV RNA基因型的血浆制备HCV基因型对照血清。HDV RNA主储备液取自慢性丁型肝炎患者,这些患者根据世界卫生组织为开发HDV RNA对照血清而编制的病毒载量研究参考材料,检测到大量病毒载量。通过稀释从该主储备液制备具有不同病毒载量的样本。将制备好的对照品分发给注册实验室。实验室进行相关检测,并通过MOTAKK网页输入结果。参与者的外部质量评估(EQA)报告也上传至网站。

结果

共有23个参与实验室,其中20个专门进行HCV基因分型,2015年和2016年分别有15个和16个仅进行HDV RNA检测。2015年HCV基因型检测结果的成功率为56% - 96%,2016年为30% - 95%。成功率为30%的样本管含有重组型HCV,因此在大多数实验室中无法检测到。HDV RNA结果进行定性评估。据此,参与实验室的HDV RNA检测率在2015年为71% - 100%,2016年为50% - 100%。

结论

本研究是土耳其分子微生物学领域关于HCV RNA基因分型和HDV RNA的首个全国性外部质量控制项目,且实施成功。