CNR Institute of Molecular Genetics "Luigi-Luca Cavalli-Sforza" Unit of Bologna, Bologna, Italy; IRCCS Istituto Ortopedico Rizzoli, Bologna, Italy.
Dipartimento di Farmacia e Biotecnologie, Alma Mater Studiorum Università di Bologna, Bologna, Italy.
Ageing Res Rev. 2020 Jan;57:100995. doi: 10.1016/j.arr.2019.100995. Epub 2019 Nov 28.
Eukaryotic genomes contain a large number of transposable elements, part of which are still active and able to transpose in the host genome. Mobile element activation is repressed to avoid deleterious effects, such as gene mutations or chromosome rearrangements. Control of transposable elements includes a variety of mechanisms comprising silencing pathways, which are based on the production of small non-coding RNAs. Silencing can occur either through transposable element RNA degradation or through the targeting of DNA sequences by heterochromatin formation and consequent transcriptional inhibition. Since the important role of the heterochromatin silencing, the gradual loss of heterochromatin marks in constitutive heterochromatin regions during the aging process promotes derepression of transposable elements, which is considered a cause of the progressive increase in genomic instability and of the activation of inflammatory responses. This review provides an overview of the effects of heterochromatin loss on the activity of transposable elements during the aging process and the possible impact on genome function. In this context, we discuss the possible role of the nuclear lamina, a major player in heterochromatin dynamics, in the regulation of transposable element activity and potential implications in laminopathic diseases.
真核生物基因组中含有大量转座元件,其中一部分仍然活跃,并能够在宿主基因组中转位。为了避免有害影响,如基因突变或染色体重排,转座元件的激活受到抑制。对转座元件的控制包括多种机制,包括沉默途径,这些途径基于小非编码 RNA 的产生。沉默可以通过转座元件 RNA 的降解或通过异染色质形成和随后的转录抑制来靶向 DNA 序列来发生。由于异染色质沉默的重要作用,在衰老过程中组成型异染色质区域中异染色质标记的逐渐丧失促进了转座元件的去抑制,这被认为是基因组不稳定性逐渐增加和炎症反应激活的原因。
这篇综述概述了异染色质丧失对衰老过程中转座元件活性的影响,以及对基因组功能的可能影响。在这方面,我们讨论了核纤层作为异染色质动力学的主要参与者在调节转座元件活性方面的可能作用,以及在核纤层病中的潜在影响。