Krzykalla Julia, Benner Axel, Kopp-Schneider Annette
Division of Biostatistics, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Medizinische Fakultät, Universität Heidelberg, Germany.
Stat Med. 2020 Mar 30;39(7):923-939. doi: 10.1002/sim.8452. Epub 2019 Dec 21.
One of the main endeavours in present-day medicine, especially in oncological research, is to provide evidence for individual treatment decisions ("stratified medicine"). In the pursuit of optimal treatment decision rules, the identification of predictive biomarkers that modify the treatment effect is essential. Proposed methods have often been based on recursive partitioning since a wide variety of interaction patterns can be captured automatically and the results are easily interpretable. Furthermore, these methods are readily extendable to high-dimensional settings by means of ensemble learning. In this article, we present predMOB, an adaptation of the model-based recursive partitioning (MOB) for subgroup analysis approach specifically tailored to the identification of predictive factors. In a simulation study, predMOB outperforms the original MOB with respect to the number of false detections and shows to be more robust in moderately complex settings. Furthermore, we compare the results of predMOB for the application to a public data base of amyotrophic lateral sclerosis patients to those obtained from the original MOB and are able to elucidate the nature of the biomarkers' effects.
当今医学的主要努力方向之一,尤其是在肿瘤学研究中,是为个体治疗决策(“分层医学”)提供证据。在追求最优治疗决策规则的过程中,识别能够改变治疗效果的预测性生物标志物至关重要。由于可以自动捕捉各种各样的相互作用模式且结果易于解释,因此提出的方法通常基于递归划分。此外,通过集成学习,这些方法很容易扩展到高维情况。在本文中,我们提出了predMOB,它是基于模型的递归划分(MOB)的一种改编,用于专门针对识别预测因素的亚组分析方法。在一项模拟研究中,predMOB在错误检测数量方面优于原始的MOB,并且在中等复杂的情况下表现得更稳健。此外,我们将predMOB应用于肌萎缩侧索硬化症患者公共数据库的结果与从原始MOB获得的结果进行了比较,并且能够阐明生物标志物效应的性质。