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在肉孢子虫 Sarcocystis aucheniae 的糖基磷脂酰肌醇代谢中免疫治疗和诊断靶点的计算机鉴定。

In silico identification of immunotherapeutic and diagnostic targets in the glycosylphosphatidylinositol metabolism of the coccidian Sarcocystis aucheniae.

机构信息

Instituto de Patobiología Veterinaria, CICVyA, INTA-Castelar, Hurlingham, Buenos Aires, Argentina.

Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina.

出版信息

Transbound Emerg Dis. 2020 Jul;67 Suppl 2:165-174. doi: 10.1111/tbed.13438. Epub 2019 Dec 27.

Abstract

Meat of the South American camelids (SACs) llama and alpaca is an important source of animal protein and income for rural families in the Andes, and a product with significant growth potential for local and international markets. However, infestation with macroscopic cysts of the coccidian protozoon Sarcocystis aucheniae, a parasitosis known as SAC sarcocystosis, significantly hampers its commercialization. There are no validated methods to diagnose the presence of S. aucheniae cysts other than carcass examination. Moreover, there are no available drugs or vaccines to cure or prevent SAC sarcocystosis. Identification of relevant molecules that act at the host-pathogen interface can significantly contribute to the control of this disease. It has been shown for other pathogenic protozoa that glycosylphosphatidylinositol (GPI) is a critical molecule implicated in parasite survival and pathogenicity. This study focused on the identification of the enzymes that participate in the S. aucheniae GPI biosynthetic pathway and the repertoire of the parasite GPI-anchored proteins (GPI-APs). To this aim, RNA was extracted from parasite cysts and the transcriptome was sequenced and translated into amino acid sequences. The generated database was mined using sequences of well-characterized GPI biosynthetic enzymes of Saccharomyces cerevisiae and Toxoplasma gondii. Eleven enzymes predicted to participate in the S. aucheniae GPI biosynthetic pathway were identified. On the other hand, the database was searched for proteins carrying an N-terminal signal peptide and a single C-terminal transmembrane region containing a GPI anchor signal. Twenty-four GPI-anchored peptides were identified, of which nine are likely S. aucheniae-specific, and 15 are homologous to membrane proteins of other coccidians. Among the latter, 13 belong to the SRS domain superfamily, an extensive group of coccidian GPI-anchored proteins that mediate parasite interaction with their host. Phylogenetic analysis showed a great degree of intra- and inter-specific divergence among SRS family proteins. In vitro and in vivo experiments are needed to validate S. aucheniae GPI biosynthetic enzymes and GPI-APs as drug targets and/or as vaccine or diagnostic antigens.

摘要

南美洲驼羊(骆马和羊驼)的肉是安第斯地区农村家庭重要的动物蛋白和收入来源,也是当地和国际市场具有巨大增长潜力的产品。然而,由于肉孢子虫原生动物 Sarcocystis aucheniae 的宏观包囊的感染,即所谓的 SAC 肉孢子虫病,其商业化受到严重阻碍。除了胴体检查外,目前没有其他验证方法可以诊断 S. aucheniae 包囊的存在。此外,目前还没有可用于治疗或预防 SAC 肉孢子虫病的药物或疫苗。鉴定在宿主-病原体界面起作用的相关分子可以极大地有助于控制这种疾病。已经表明,对于其他致病性原生动物,糖基磷脂酰肌醇(GPI)是涉及寄生虫存活和致病性的关键分子。本研究专注于鉴定参与 S. aucheniae GPI 生物合成途径的酶和寄生虫 GPI 锚定蛋白(GPI-AP)的 repertoire。为此,从寄生虫包囊中提取 RNA,并对转录组进行测序和翻译成氨基酸序列。使用已充分表征的酿酒酵母和刚地弓形虫 GPI 生物合成酶的序列对生成的数据库进行挖掘。鉴定出 11 种预测参与 S. aucheniae GPI 生物合成途径的酶。另一方面,数据库被搜索携带 N 端信号肽和单个 C 端跨膜区的蛋白质,该跨膜区包含 GPI 锚定信号。鉴定出 24 个 GPI 锚定肽,其中 9 个可能是 S. aucheniae 特异性的,15 个与其他球虫的膜蛋白同源。后者中有 13 个属于 SRS 结构域超家族,这是一个广泛的球虫 GPI 锚定蛋白家族,介导寄生虫与其宿主的相互作用。系统发育分析显示 SRS 家族蛋白在种内和种间存在很大程度的分化。需要进行体内和体外实验来验证 S. aucheniae GPI 生物合成酶和 GPI-AP 作为药物靶点和/或疫苗或诊断抗原。

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