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新型 功能丧失变异与伊朗和巴基斯坦患者的隐性感觉神经性听力损失有关。

Novel Loss-of-Function Variants in are Associated with Recessive Sensorineural Hearing Loss in Iranian and Pakistani Patients.

机构信息

Institute of Human Genetics, Julius Maximilians University, 97074 Würzburg, Germany.

Cellular and Molecular Research Center, Sabzevar University of Medical Sciences, Sabzevar 009851, Iran.

出版信息

Int J Mol Sci. 2020 Jan 2;21(1):311. doi: 10.3390/ijms21010311.

Abstract

encodes the Cell Division Cycle 14A protein and has been associated with autosomal recessive non-syndromic hearing loss (DFNB32), as well as hearing impairment and infertile male syndrome (HIIMS) since 2016. To date, only nine variants have been associated in patients whose initial symptoms included moderate-to-profound hearing impairment. Exome analysis of Iranian and Pakistani probands who both showed bilateral, sensorineural hearing loss revealed a novel splice site variant (c.1421+2T>C, p.?) that disrupts the splice donor site and a novel frameshift variant (c.1041dup, p.Ser348Glnfs2) in the gene , respectively. To evaluate the pathogenicity of both loss-of-function variants, we analyzed the effects of both variants on the RNA-level. The splice variant was characterized using a minigene assay. Altered expression levels due to the c.1041dup variant were assessed using RT-qPCR. In summary, cDNA analysis confirmed that the c.1421+2T>C variant activates a cryptic splice site, resulting in a truncated transcript (c.1414_1421del, p.Val472Leufs20) and the c.1041dup variant results in a defective transcript that is likely degraded by nonsense-mediated mRNA decay. The present study functionally characterizes two variants and provides further confirmatory evidence that is associated with a rare form of hereditary hearing loss.

摘要

编码细胞分裂周期蛋白 14A 蛋白,自 2016 年以来,与常染色体隐性非综合征性听力损失(DFNB32)以及听力障碍和不育男性综合征(HIIMS)有关。迄今为止,只有在最初症状包括中度至重度听力障碍的患者中发现了 9 种相关变异。对伊朗和巴基斯坦先证者的外显子组分析显示,这两个先证者均表现为双侧感音神经性听力损失,分别发现了一个新的剪接位点变异(c.1421+2T>C,p.?),该变异破坏了剪接供体部位,以及基因中的一个新的移码变异(c.1041dup,p.Ser348Glnfs2)。为了评估这两种失活变异的致病性,我们分析了这两种变异对 RNA 水平的影响。剪接变异使用小基因检测进行了鉴定。使用 RT-qPCR 评估了由于 c.1041dup 变异引起的表达水平变化。总之,cDNA 分析证实 c.1421+2T>C 变异激活了一个隐秘的剪接位点,导致截短的转录本(c.1414_1421del,p.Val472Leufs20),而 c.1041dup 变异导致的转录本存在缺陷,可能通过无义介导的 mRNA 降解而被降解。本研究对两种变异进行了功能特征分析,并提供了进一步的确认证据,表明 与一种罕见的遗传性听力损失形式有关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f39f/6982189/4f3b72e8675a/ijms-21-00311-g001.jpg

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