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栖息于红海地方性和新发现海绵和八放珊瑚中的原核生物群落。

Prokaryote Communities Inhabiting Endemic and Newly Discovered Sponges and Octocorals from the Red Sea.

机构信息

Department of Biology & CESAM, University of Aveiro, Campus de Santiago, 3810-193, Aveiro, Portugal.

Marine Biodiversity, Naturalis Biodiversity Center, Leiden, The Netherlands.

出版信息

Microb Ecol. 2020 Jul;80(1):103-119. doi: 10.1007/s00248-019-01465-w. Epub 2020 Jan 14.

Abstract

In the present study, we assessed prokaryotic communities of demosponges, a calcareous sponge, octocorals, sediment and seawater in coral reef habitat of the central Red Sea, including endemic species and species new to science. Goals of the study were to compare the prokaryotic communities of demosponges with the calcareous sponge and octocorals and to assign preliminary high microbial abundance (HMA) or low microbial abundance (LMA) status to the sponge species based on compositional trait data. Based on the compositional data, we were able to assign preliminary LMA or HMA status to all sponge species. Certain species, however, had traits of both LMA and HMA species. For example, the sponge Ectyoplasia coccinea, which appeared to be a LMA species, had traits, including a relatively high abundance of Chloroflexi members, that were more typical of HMA species. This included dominant OTUs assigned to two different classes within the Chloroflexi. The calcareous sponge clustered together with seawater, the known LMA sponge Stylissa carteri and other presumable LMA species. The two dominant OTUs of this species were assigned to the Deltaproteobacteria and had no close relatives in the GenBank database. The octocoral species in the present study had prokaryotic communities that were distinct from sediment, seawater and all sponge species. These were characterised by OTUs assigned to the orders Rhodospirillales, Cellvibrionales, Spirochaetales and the genus Endozoicomonas, which were rare or absent in samples from other biotopes.

摘要

在本研究中,我们评估了红海中部珊瑚礁生境中钙质海绵、八放珊瑚、沉积物和海水中的原核生物群落,包括特有种和新种。研究的目的是比较海绵与钙质海绵和八放珊瑚的原核生物群落,并根据组成特征数据初步确定海绵物种的高微生物丰度(HMA)或低微生物丰度(LMA)状态。基于组成数据,我们能够初步确定所有海绵物种的 LMA 或 HMA 状态。然而,某些物种具有 LMA 和 HMA 物种的特征。例如,Ectyoplasia coccinea 海绵似乎是一种 LMA 物种,但具有相对较高丰度的绿弯菌门成员等特征,这些特征更典型的是 HMA 物种。这包括属于绿弯菌门两个不同类别的优势 OTU。钙质海绵与海水聚集在一起,与已知的 LMA 海绵 Stylissa carteri 和其他可能的 LMA 物种聚集在一起。该物种的两个主要 OTU 被分配到了δ变形菌门,在 GenBank 数据库中没有密切相关的亲缘关系。本研究中的八放珊瑚物种的原核生物群落与沉积物、海水和所有海绵物种都不同。这些物种的特征是属于红螺菌目、纤维杆菌目、螺旋体目和内共生单胞菌属的 OTU,这些 OTU 在其他生境样本中很少或不存在。

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