Dittami Simon M, Peters Akira F, West John A, Cariou Thierry, KleinJan Hetty, Burgunter-Delamare Bertille, Prechoux Aurélie, Egan Suhelen, Boyen Catherine
CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, Sorbonne Université, 29680, Roscoff, France.
Bezhin Rosko, 40 Rue des Pêcheurs, 29250, Santec, France.
J Phycol. 2020 Jun;56(3):719-729. doi: 10.1111/jpy.12970. Epub 2020 Feb 28.
In 1995 a strain of Ectocarpus was isolated from Hopkins River Falls, Victoria, Australia, constituting one of few available freshwater or nearly freshwater brown algae, and the only one belonging to the genus Ectocarpus. It has since been used as a model to study acclimation and adaptation to low salinities and the role of its microbiota in these processes. To provide more background information on this model, we assessed if Ectocarpus was still present in the Hopkins river 22 years after the original finding, estimated its present distribution, described its abiotic environment, and determined its in situ microbial composition. We sampled for Ectocarpus at 15 sites along the Hopkins River as well as 10 neighboring sites and found individuals with ITS and cox1 sequences identical to the original isolate at three sites upstream of Hopkins River Falls. The salinity of the water at these sites ranged from 3.1 to 6.9, and it was rich in sulfate (1-5 mM). The diversity of bacteria associated with the algae in situ (1312 operational taxonomic units) was one order of magnitude higher than in previous studies of the original laboratory culture, and 95 alga-associated bacterial strains were isolated from algal filaments on site. In particular, species of Planctomycetes were abundant in situ but rare in laboratory cultures. Our results confirmed that Ectocarpus was still present in the Hopkins River, and the newly isolated algal and bacterial strains offer new possibilities to study the adaptation of Ectocarpus to low salinity and its interactions with its microbiome.
1995年,一种鹿角菜属藻类从澳大利亚维多利亚州的霍普金斯河瀑布分离出来,这是为数不多的淡水或近淡水褐藻之一,也是鹿角菜属的唯一一种。从那以后,它被用作研究适应低盐度以及其微生物群在这些过程中的作用的模型。为了提供关于这个模型的更多背景信息,我们评估了在最初发现22年后,鹿角菜属藻类是否仍存在于霍普金斯河中,估计了它目前的分布,描述了其非生物环境,并确定了其原位微生物组成。我们在霍普金斯河沿线的15个地点以及10个相邻地点采集了鹿角菜属藻类样本,在霍普金斯河瀑布上游的三个地点发现了与原始分离株具有相同ITS和cox1序列的个体。这些地点的水盐度范围为3.1至6.9,且富含硫酸盐(1 - 5 mM)。与原位藻类相关的细菌多样性(1312个操作分类单元)比之前对原始实验室培养物的研究高一个数量级,并且从现场的藻丝中分离出了95株与藻类相关的细菌菌株。特别是,浮霉菌门的物种在原位丰富,但在实验室培养物中很少见。我们的结果证实了鹿角菜属藻类仍存在于霍普金斯河中,新分离的藻类和细菌菌株为研究鹿角菜属藻类对低盐度的适应及其与微生物群的相互作用提供了新的可能性。