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影响……中细胞器基因组稳定性的因素

Factors Affecting Organelle Genome Stability in .

作者信息

Odahara Masaki

机构信息

Biomacromolecules Research Team, RIKEN Center for Sustainable Resource Science, 2-1 Hirosawa, Wako-shi, Saitama 351-0198, Japan.

出版信息

Plants (Basel). 2020 Jan 23;9(2):145. doi: 10.3390/plants9020145.

DOI:10.3390/plants9020145
PMID:31979236
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7076466/
Abstract

Organelle genomes are essential for plants; however, the mechanisms underlying the maintenance of organelle genomes are incompletely understood. Using the basal land plant as a model, nuclear-encoded homologs of bacterial-type homologous recombination repair (HRR) factors have been shown to play an important role in the maintenance of organelle genome stability by suppressing recombination between short dispersed repeats. In this review, I summarize the factors and pathways involved in the maintenance of genome stability, as well as the repeats that cause genomic instability in organelles in , and compare them with findings in other plant species. I also discuss the relationship between HRR factors and organelle genome structure from the evolutionary standpoint.

摘要

细胞器基因组对植物至关重要;然而,维持细胞器基因组的潜在机制尚未完全明确。以基部陆地植物为模型,已表明细菌型同源重组修复(HRR)因子的核编码同源物通过抑制短分散重复序列之间的重组,在维持细胞器基因组稳定性方面发挥重要作用。在这篇综述中,我总结了参与维持基因组稳定性的因子和途径,以及在基部陆地植物中导致细胞器基因组不稳定的重复序列,并将它们与其他植物物种的研究结果进行比较。我还从进化的角度讨论了HRR因子与细胞器基因组结构之间的关系。

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本文引用的文献

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The alternative reality of plant mitochondrial DNA: One ring does not rule them all.植物线粒体 DNA 的另类现实:一环不及其余。
PLoS Genet. 2019 Aug 30;15(8):e1008373. doi: 10.1371/journal.pgen.1008373. eCollection 2019 Aug.
2
The GIY-YIG endonuclease domain of Arabidopsis MutS homolog 1 specifically binds to branched DNA structures.拟南芥 MutS 同源物 1 的 GIY-YIG 内切酶结构域特异性结合到分支 DNA 结构。
FEBS Lett. 2018 Dec;592(24):4066-4077. doi: 10.1002/1873-3468.13279. Epub 2018 Nov 8.
3
RECX Interacts with Mitochondrial RECA to Maintain Mitochondrial Genome Stability.
Holliday 连接酶解旋酶 MOC1 维持藻类和苔藓植物的质体和线粒体基因组完整性。
Plant Physiol. 2020 Dec;184(4):1870-1883. doi: 10.1104/pp.20.00763. Epub 2020 Sep 25.
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is required for maintenance of the low mutation rates in plant mitochondrial and plastid genomes.其对于维持植物线粒体和质体基因组的低突变率是必需的。
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Plant Organelle DNA Maintenance.植物细胞器DNA的维护
Plants (Basel). 2020 May 28;9(6):683. doi: 10.3390/plants9060683.
RECX 与线粒体 RECA 相互作用以维持线粒体基因组稳定性。
Plant Physiol. 2018 May;177(1):300-310. doi: 10.1104/pp.18.00218. Epub 2018 Mar 26.
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Correction of Persistent Errors in Arabidopsis Reference Mitochondrial Genomes.拟南芥参考线粒体基因组中持续错误的校正
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5
The Physcomitrella patens chromosome-scale assembly reveals moss genome structure and evolution.Physcomitrella patens 染色体级别的组装揭示了苔藓植物基因组的结构和进化。
Plant J. 2018 Feb;93(3):515-533. doi: 10.1111/tpj.13801.
6
Holliday junction resolvases mediate chloroplast nucleoid segregation.Holliday 连接酶介导叶绿体核区分离。
Science. 2017 May 12;356(6338):631-634. doi: 10.1126/science.aan0038.
7
MSH1 maintains organelle genome stability and genetically interacts with RECA and RECG in the moss Physcomitrella patens.MSH1维持细胞器基因组稳定性,并在小立碗藓中与RECA和RECG发生遗传相互作用。
Plant J. 2017 Aug;91(3):455-465. doi: 10.1111/tpj.13573. Epub 2017 Jun 1.
8
Dynamic Interplay between Nucleoid Segregation and Genome Integrity in Chlamydomonas Chloroplasts.衣藻叶绿体中拟核分离与基因组完整性之间的动态相互作用
Plant Physiol. 2016 Dec;172(4):2337-2346. doi: 10.1104/pp.16.01533. Epub 2016 Oct 17.
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Plant J. 2015 Nov;84(3):516-26. doi: 10.1111/tpj.13017. Epub 2015 Oct 15.