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荧光染料的位点特异性蛋白质标记作为监测蛋白质周转的工具。

Site-Specific Protein Labeling with Fluorophores as a Tool To Monitor Protein Turnover.

机构信息

Center for Integrated Protein Science Munich (CIPSM) at the Department of Chemistry, Technical University of Munich, Lichtenbergstrasse 4, 85748, Garching, Germany.

Current address: Institute of Molecular Biology and Biophysics, ETH Zürich, 8093, Zürich, Switzerland.

出版信息

Chembiochem. 2020 Jul 1;21(13):1861-1867. doi: 10.1002/cbic.201900651. Epub 2020 Mar 9.

DOI:10.1002/cbic.201900651
PMID:32011787
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7383901/
Abstract

Proteins that terminally fail to acquire their native structure are detected and degraded by cellular quality control systems. Insights into cellular protein quality control are key to a better understanding of how cells establish and maintain the integrity of their proteome and of how failures in these processes cause human disease. Here we have used genetic code expansion and fast bio-orthogonal reactions to monitor protein turnover in mammalian cells through a fluorescence-based assay. We have used immune signaling molecules (interleukins) as model substrates and shown that our approach preserves normal cellular quality control, assembly processes, and protein functionality and works for different proteins and fluorophores. We have further extended our approach to a pulse-chase type of assay that can provide kinetic insights into cellular protein behavior. Taken together, this study establishes a minimally invasive method to investigate protein turnover in cells as a key determinant of cellular homeostasis.

摘要

细胞质量控制系统可以检测和降解那些最终无法获得其天然结构的蛋白质。深入了解细胞的蛋白质质量控制对于更好地理解细胞如何建立和维持其蛋白质组的完整性,以及这些过程的失败如何导致人类疾病至关重要。在这里,我们使用遗传密码扩展和快速生物正交反应,通过基于荧光的测定法在哺乳动物细胞中监测蛋白质周转。我们使用免疫信号分子(白细胞介素)作为模型底物,并表明我们的方法保留了正常的细胞质量控制、组装过程和蛋白质功能,并且适用于不同的蛋白质和荧光团。我们还进一步扩展了我们的方法,使其成为一种可以提供细胞内蛋白质行为动力学见解的脉冲追踪类型的测定法。总之,这项研究建立了一种微创方法来研究细胞内蛋白质周转,这是细胞内稳态的关键决定因素。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d4c5/7383901/665090124033/CBIC-21-1861-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d4c5/7383901/c25d7ace607d/CBIC-21-1861-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d4c5/7383901/4671224f7928/CBIC-21-1861-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d4c5/7383901/4afc65ae0145/CBIC-21-1861-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d4c5/7383901/665090124033/CBIC-21-1861-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d4c5/7383901/c25d7ace607d/CBIC-21-1861-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d4c5/7383901/4671224f7928/CBIC-21-1861-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d4c5/7383901/4afc65ae0145/CBIC-21-1861-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d4c5/7383901/665090124033/CBIC-21-1861-g004.jpg

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Nat Commun. 2019 Sep 11;10(1):4121. doi: 10.1038/s41467-019-12006-x.
2
Photo-induced and Rapid Labeling of Tetrazine-Bearing Proteins via Cyclopropenone-Caged Bicyclononynes.利用环丙烯酮封闭的双环壬炔对含四嗪蛋白的光诱导和快速标记。
Angew Chem Int Ed Engl. 2019 Oct 28;58(44):15876-15882. doi: 10.1002/anie.201908209. Epub 2019 Sep 24.
3
Quantitative Single-Residue Bioorthogonal Labeling of G Protein-Coupled Receptors in Live Cells.
通过重水代谢标记对两种质量同位素异构体的标记富集进行定量,可提高体内蛋白质周转率的蛋白质组覆盖率。
Commun Chem. 2023 Apr 17;6(1):72. doi: 10.1038/s42004-023-00873-x.
4
Insights into receptor structure and dynamics at the surface of living cells.活细胞表面受体结构和动力学的新见解。
Nat Commun. 2023 Mar 22;14(1):1596. doi: 10.1038/s41467-023-37284-4.
5
Bioorthogonal chemistry.生物正交化学
Nat Rev Methods Primers. 2021;1. doi: 10.1038/s43586-021-00028-z. Epub 2021 Apr 15.
6
Identification of permissive amber suppression sites for efficient non-canonical amino acid incorporation in mammalian cells.鉴定哺乳动物细胞中高效非天然氨基酸掺入的宽容琥珀终止密码子抑制位点。
Nucleic Acids Res. 2021 Jun 21;49(11):e62. doi: 10.1093/nar/gkab132.
定量活细胞内 G 蛋白偶联受体的单残留生物正交标记
ACS Chem Biol. 2019 Jun 21;14(6):1141-1149. doi: 10.1021/acschembio.8b01115. Epub 2019 May 23.
4
Protein Quality Control in the Endoplasmic Reticulum.内质网中的蛋白质质量控制。
Protein J. 2019 Jun;38(3):317-329. doi: 10.1007/s10930-019-09831-w.
5
The Immunobiology of the Interleukin-12 Family: Room for Discovery.白细胞介素-12 家族的免疫生物学:探索的空间。
Immunity. 2019 Apr 16;50(4):851-870. doi: 10.1016/j.immuni.2019.03.011.
6
Genetic Code Expansion Method for Temporal Labeling of Endogenously Expressed Proteins.遗传密码扩展方法用于内源性表达蛋白的时间标记。
ACS Chem Biol. 2018 Nov 16;13(11):3049-3053. doi: 10.1021/acschembio.8b00594. Epub 2018 Oct 17.
7
Live Cell Imaging of Bioorthogonally Labelled Proteins Generated With a Single Pyrrolysine tRNA Gene.利用单个吡咯赖氨酸 tRNA 基因生成的生物正交标记蛋白的活细胞成像。
Sci Rep. 2018 Sep 28;8(1):14527. doi: 10.1038/s41598-018-32824-1.
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Mol Cell. 2018 Sep 20;71(6):1079-1091.e9. doi: 10.1016/j.molcel.2018.07.023. Epub 2018 Aug 23.
9
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Mol Biol Cell. 2017 Oct 15;28(21):2747-2756. doi: 10.1091/mbc.E17-03-0161. Epub 2017 Aug 23.