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J Bacteriol. 2020 Mar 26;202(8). doi: 10.1128/JB.00640-19.
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2
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3
Affinity-based capture and identification of protein effectors of the growth regulator ppGpp.基于亲和性的捕获和鉴定生长调节剂 ppGpp 的蛋白效应子。
Nat Chem Biol. 2019 Feb;15(2):141-150. doi: 10.1038/s41589-018-0183-4. Epub 2018 Dec 17.
4
Proposal of serovars 17 and 18 of Actinobacillus pleuropneumoniae based on serological and genotypic analysis.基于血清学和基因型分析的胸膜肺炎放线杆菌 17 血清型和 18 血清型的建议。
Vet Microbiol. 2018 Apr;217:1-6. doi: 10.1016/j.vetmic.2018.02.019. Epub 2018 Feb 16.
5
Novel (p)ppGpp Binding and Metabolizing Proteins of .新型(p)ppGpp 结合和代谢蛋白
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6
Triggering the stringent response: signals responsible for activating (p)ppGpp synthesis in bacteria.触发严谨反应:负责激活细菌中 (p)ppGpp 合成的信号。
Microbiology (Reading). 2018 Mar;164(3):268-276. doi: 10.1099/mic.0.000621.
7
A Unique Capsule Locus in the Newly Designated Actinobacillus pleuropneumoniae Serovar 16 and Development of a Diagnostic PCR Assay.新指定的胸膜肺炎放线杆菌血清型16中的一个独特的荚膜位点及诊断性聚合酶链反应检测方法的开发
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8
(p)ppGpp synthetases regulate the pathogenesis of zoonotic Streptococcus suis.(p)ppGpp合成酶调节猪链球菌病的发病机制。
Microbiol Res. 2016 Oct;191:1-11. doi: 10.1016/j.micres.2016.05.007. Epub 2016 May 19.
9
(p)ppGpp and the bacterial cell cycle.(p)ppGpp与细菌细胞周期
J Biosci. 2016 Jun;41(2):277-82. doi: 10.1007/s12038-016-9611-3.
10
ppGpp Binding to a Site at the RNAP-DksA Interface Accounts for Its Dramatic Effects on Transcription Initiation during the Stringent Response.在严谨反应期间,ppGpp与RNA聚合酶(RNAP)-DksA界面处的一个位点结合,这解释了其对转录起始产生显著影响的原因。
Mol Cell. 2016 Jun 16;62(6):811-823. doi: 10.1016/j.molcel.2016.04.029. Epub 2016 May 26.

(p)ppGpp 在缺乏支链氨基酸时对胸膜肺炎放线杆菌的基础水平效应。

Basal-Level Effects of (p)ppGpp in the Absence of Branched-Chain Amino Acids in Actinobacillus pleuropneumoniae.

机构信息

State Key Laboratory of Veterinary Biotechnology, Division of Bacterial Diseases, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Harbin, China.

Key Laboratory of Special Pathogens and Biosafety, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan, China.

出版信息

J Bacteriol. 2020 Mar 26;202(8). doi: 10.1128/JB.00640-19.

DOI:10.1128/JB.00640-19
PMID:32015147
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7099145/
Abstract

The (p)ppGpp-mediated stringent response (SR) is a highly conserved regulatory mechanism in bacterial pathogens, enabling adaptation to adverse environments, and is linked to pathogenesis. can cause damage to the lungs of pigs, its only known natural host. Pig lungs are known to have a low concentration of free branched-chain amino acids (BCAAs) compared to the level in plasma. We had investigated the role for (p)ppGpp in viability and biofilm formation of Now, we sought to determine whether (p)ppGpp was a trigger signal for the SR in in the absence of BCAAs. Combining transcriptome and phenotypic analyses of the wild type (WT) and an double mutant [which does not produce (p)ppGpp], we found that (p)ppGpp could repress purine biosynthesis and activate antioxidant pathways. There was a positive correlation between GTP and endogenous hydrogen peroxide content. Furthermore, the growth, viability, morphology, and virulence were altered by the inability to produce (p)ppGpp. Genes involved in the biosynthesis of BCAAs were constitutively upregulated, regardless of the existence of BCAAs, without accumulation of (p)ppGpp beyond a basal level. Collectively, our study shows that the absence of BCAAs was not a sufficient signal to trigger the SR in (p)ppGpp-mediated regulation in is different from that described for the model organism Further work will establish whether the (p)ppGpp-dependent SR mechanism in is conserved among other veterinary pathogens, especially those in the family. (p)ppGpp is a key player in reprogramming transcriptomes to respond to nutritional challenges. Here, we present transcriptional and phenotypic differences of grown in different chemically defined media in the absence of (p)ppGpp. We show that the deprivation of branched-chain amino acids (BCAAs) does not elicit a change in the basal-level (p)ppGpp, but this level is sufficient to regulate the expression of BCAA biosynthesis. The mechanism found in is different from that of the model organism but similar to that found in some Gram-positive bacteria. This study not only broadens the research scope of (p)ppGpp but also further validates the complexity and multiplicity of (p)ppGpp regulation in microorganisms that occupy different biological niches.

摘要

(p)ppGpp 介导的严格反应 (SR) 是细菌病原体中一种高度保守的调节机制,使它们能够适应不利环境,并与发病机制有关。 可以对其唯一的天然宿主猪的肺部造成损害。众所周知,与血浆中的水平相比,猪肺中的游离支链氨基酸 (BCAA) 浓度较低。我们已经研究了 (p)ppGpp 在 的活力和生物膜形成中的作用。现在,我们试图确定在没有 BCAA 的情况下,(p)ppGpp 是否是 中 SR 的触发信号。通过对野生型 (WT) 和 双突变体 [不能产生 (p)ppGpp] 的转录组和表型分析,我们发现 (p)ppGpp 可以抑制 嘌呤生物合成并激活抗氧化途径。GTP 和内源性过氧化氢含量之间存在正相关。此外,不能产生 (p)ppGpp 会改变 的生长、活力、形态和毒力。无论是否存在 BCAA,参与 BCAA 生物合成的基因都被组成性地上调,而 (p)ppGpp 不会在基础水平之上积累。总的来说,我们的研究表明,缺乏 BCAA 不足以触发 中 SR 的发生。(p)ppGpp 介导的 在 中的调节与模型生物 中描述的不同。进一步的工作将确定 中 (p)ppGpp 依赖性 SR 机制是否在其他兽医病原体中保守,特别是在 科中。(p)ppGpp 是一种关键的转录重编程因子,可响应营养挑战。在这里,我们展示了在缺乏 (p)ppGpp 的情况下,在不同的化学定义培养基中生长的 之间的转录和表型差异。我们表明,剥夺支链氨基酸 (BCAA) 不会引起基础水平 (p)ppGpp 的变化,但这一水平足以调节 BCAA 生物合成的表达。在 中发现的机制与模型生物 不同,但与一些革兰氏阳性细菌相似。这项研究不仅拓宽了 (p)ppGpp 的研究范围,而且进一步验证了在占据不同生物位的微生物中,(p)ppGpp 调节的复杂性和多样性。