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用于分离条件性分枝杆菌突变体的转座子构建与应用

Construction and Use of Transposon for Isolation of Conditional Mycobacteria Mutants.

作者信息

Riggs-Shute Sarah D, Falkinham Joseph O, Yang Zhaomin

机构信息

Department of Biological Sciences, Virginia Tech, Blacksburg, VA, United States.

Department of Biology, Tidewater Community College, Portsmouth, VA, United States.

出版信息

Front Microbiol. 2020 Jan 21;10:3091. doi: 10.3389/fmicb.2019.03091. eCollection 2019.

Abstract

Mycobacteria are unique in many aspects of their biology. The development of genetic tools to identify genes critical for their growth by forward genetic analysis holds great promises to advance our understanding of their cellular, physiological and biochemical processes. Here we report the development of a novel transposon, , to aid the identification of such genes by direct transposon mutagenesis. This -based transposon contains nested anhydrotetracycline (ATc)-inducible promoters to drive transcription outward from both of its ends. In addition, it includes the R6Kγ origin to facilitate the identification of insertion sites. was placed in a shuttle plasmid with a temperature-sensitive DNA replication origin in mycobacteria. This allows propagation of mycobacteria harboring the plasmid at a permissive temperature. The resulting population of cells can then be subjected to a temperature shift to select for transposon mutants. This transposon and its delivery system, once constructed, were tested in the fast-growing model and 13 mutants with ATc-dependent growth were isolated. The identification of the insertion sites in these mutants led to nine unique genetic loci with genes critical for essential processes in both and . These results demonstrate that and its delivery vector provide valuable tools for the studies of mycobacteria by forward genetics.

摘要

分枝杆菌在其生物学的许多方面都很独特。通过正向遗传学分析开发用于鉴定对其生长至关重要的基因的遗传工具,有望极大地促进我们对其细胞、生理和生化过程的理解。在此,我们报告了一种新型转座子的开发,以通过直接转座子诱变来辅助鉴定此类基因。这种基于[转座子名称未给出]的转座子包含嵌套的脱水四环素(ATc)诱导型启动子,以驱动从其两端向外的转录。此外,它包含R6Kγ 起源以促进插入位点的鉴定。[转座子名称未给出]被置于具有分枝杆菌中温度敏感型DNA复制起点的穿梭质粒中。这允许携带该质粒的分枝杆菌在允许温度下繁殖。然后可以对所得细胞群体进行温度转换以选择转座子突变体。一旦构建完成,这种转座子及其递送系统就在快速生长的模型[模型名称未给出]中进行了测试,并分离出了13个具有ATc依赖性生长的突变体。对这些突变体中插入位点的鉴定导致了九个独特的遗传位点,其基因对[模型名称未给出]和[另一模型名称未给出]中的基本过程至关重要。这些结果表明,[转座子名称未给出]及其递送载体为通过正向遗传学研究分枝杆菌提供了有价值的工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b63c/6985430/b6b48f851c0c/fmicb-10-03091-g001.jpg

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