Dipartimento di Farmacia, Università degli Studi "G. D'Annunzio" Chieti-Pescara, Via dei Vestini, I-66100 Chieti, Italy.
Inorg Chem. 2020 Mar 2;59(5):3312-3320. doi: 10.1021/acs.inorgchem.0c00106. Epub 2020 Feb 12.
We carried out a detailed theoretical study on the mechanism of the carbene ligand substitution by cysteine and selenocysteine residues in an Au(I) bis-N-heterocyclic carbene complex in order to model the initial stages of the mechanism of action of this promising class of antitumor metallodrug. Both neutral and deprotonated capped Cys and Sec species were considered as possible nucleophiles in the ligand exchange reaction on the metal center to model the corresponding protein side chains. Energies and geometric structures of the possible transition states and reactant- and product-adducts involved in the substitution process have been calculated using density functional theory and local MP2. Reaction and activation enthalpies and free energies have been evaluated and indicate a slightly exothermic and exergonic process with reasonably low barriers, 21.3 and 19.6 kcal mol, respectively, for capped Cys and Sec, in good agreement with the experimental data available for the reaction with free amino acids. The results suggest a mechanism for the ligand exchange reaction involving an anionic thiolate or selenothiolate species coupled to an explicit proton transfer to the leaving carbene from the acidic component of the buffer. The presence of a buffer is necessary both in in vitro experiments and under physiological conditions, and its proton reservoir behavior reveals the importance of the environmental effects in carbene substitution by biological nucleophiles.
我们对 Au(I)双氮杂环卡宾配合物中半胱氨酸和硒代半胱氨酸残基取代卡宾配体的机制进行了详细的理论研究,目的是模拟这类有前途的抗肿瘤金属药物作用机制的初始阶段。我们考虑了中性和去质子化的 capped Cys 和 Sec 物种作为金属中心配体交换反应中的可能亲核试剂,以模拟相应的蛋白质侧链。使用密度泛函理论和局部 MP2 计算了取代过程中可能的过渡态、反应物和产物加合物的能量和几何结构。评估了反应和活化焓和自由能,结果表明该过程略微放热和非自发,具有合理低的能垒,分别为 capped Cys 和 Sec 的 21.3 和 19.6 kcal/mol,与游离氨基酸反应的实验数据非常吻合。结果表明,配体交换反应的机制涉及阴离子硫醇或硒醇化物物种与缓冲剂的酸性组分向离去卡宾的明确质子转移耦合,缓冲剂的存在对于体外实验和生理条件下都是必要的,其质子储存行为揭示了环境效应对生物亲核试剂取代卡宾的重要性。