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黏多糖贮积症发病机制被低估的方面:转录组研究揭示的细胞过程的全球变化。

Underestimated Aspect of Mucopolysaccharidosis Pathogenesis: Global Changes in Cellular Processes Revealed by Transcriptomic Studies.

机构信息

Department of Molecular Biology, University of Gdansk, Wita Stwosza 59, 80-308 Gdansk, Poland.

Intelliseq Ltd., Chabrowa 12/3, Stanisława Konarskiego 42/13, 30-046 Cracow, Poland.

出版信息

Int J Mol Sci. 2020 Feb 11;21(4):1204. doi: 10.3390/ijms21041204.

Abstract

Mucopolysaccharidoses (MPS), a group of inherited metabolic disorders caused by deficiency in enzymes involved in degradation of glycosaminoglycans (GAGs), are examples (and models) of monogenic diseases. Accumulation of undegraded GAGs in lysosomes was supposed to be the major cause of MPS symptoms; however, their complexity and variability between particular types of the disease can be hardly explained by such a simple storage mechanism. Here we show that transcriptomic (RNA-seq) analysis of the material derived from fibroblasts of patients suffering from all types and subtypes of MPS, supported by RT-qPCR results, revealed surprisingly large changes in expression of genes involved in various cellular processes, indicating complex mechanisms of MPS. Although each MPS type and subtype was characterized by specific changes in gene expression profile, there were genes with significantly changed expression relative to wild-type cells that could be classified as common for various MPS types, suggesting similar disturbances in cellular processes. Therefore, both common features of all MPS types, and differences between them, might be potentially explained on the basis of changes in certain cellular processes arising from disturbed regulations of genes' expression. These results may shed a new light on the mechanisms of genetic diseases, indicating how a single mutation can result in complex pathomechanism, due to perturbations in the network of cellular reactions. Moreover, they should be considered in studies on development of novel therapies, suggesting also why currently available treatment methods fail to correct all/most symptoms of MPS. We propose a hypothesis that disturbances in some cellular processes cannot be corrected by simple reduction of GAG levels; thus, combined therapies are necessary which may require improvement of these processes.

摘要

黏多糖贮积症(MPS)是一组由于参与糖胺聚糖(GAG)降解的酶缺乏而引起的遗传性代谢疾病,是单基因疾病的范例(和模型)。溶酶体中未降解的 GAG 的积累被认为是 MPS 症状的主要原因;然而,这种简单的储存机制很难解释特定类型的疾病之间的复杂性和可变性。在这里,我们通过对患有各种类型和亚型 MPS 的患者的成纤维细胞的材料进行转录组(RNA-seq)分析(并得到 RT-qPCR 结果的支持),发现参与各种细胞过程的基因表达发生了惊人的变化,表明 MPS 存在复杂的机制。尽管每种 MPS 类型和亚型的基因表达谱都有特定的变化,但与野生型细胞相比,有一些基因的表达发生了显著变化,可以归类为各种 MPS 类型共有的基因,表明细胞过程存在相似的紊乱。因此,所有 MPS 类型的共同特征,以及它们之间的差异,都可能基于基因表达调控紊乱导致的细胞过程变化来解释。这些结果可能为遗传疾病的机制提供新的认识,表明单个突变如何由于细胞反应网络的扰动而导致复杂的病理机制。此外,这些结果应在新型治疗方法的研究中加以考虑,这也表明为什么目前可用的治疗方法无法纠正 MPS 的所有/大部分症状。我们提出了一个假设,即某些细胞过程的紊乱不能通过简单地降低 GAG 水平来纠正;因此,需要联合治疗,这可能需要改善这些过程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97f3/7072725/a05cf9a8cbc0/ijms-21-01204-g001.jpg

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