• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

第一α螺旋的 C 端 Tyr208 和 Tyr13 的相互作用确保了栉水母发光蛋白 berovin 的封闭构象。

The interaction of C-terminal Tyr208 and Tyr13 of the first α-helix ensures a closed conformation of ctenophore photoprotein berovin.

机构信息

Photobiology Laboratory, Institute of Biophysics SB RAS, Federal Research Center "Krasnoyarsk Science Center SB RAS", Krasnoyarsk, Russia.

出版信息

Photochem Photobiol Sci. 2020 Mar 1;19(3):313-323. doi: 10.1039/c9pp00436j. Epub 2020 Feb 14.

DOI:10.1039/c9pp00436j
PMID:32057065
Abstract

Light-sensitive Ca-regulated photoprotein berovin is responsible for the bioluminescence of the ctenophore Beroe abyssicola. It shares many properties of hydromedusan photoproteins although the degree of identity of its amino acid sequence with those of photoproteins is low. There is a hydrogen bond between C-terminal Pro and Arg situated in the N-terminal α-helix of hydromedusan photoproteins that supports a closed conformation of the internal cavity of the photoprotein molecule with bound 2-hydroperoxycoelenterazine. The C- and N-terminal hydrogen bond network is necessary to properly isolate the photoprotein active site from the solvent and consequently to provide a high quantum yield of the bioluminescence reaction. In order to find out which berovin residues perform the same function we modified the N- and C-termini of the protein by replacing or deleting various amino acid residues. The studies on berovin mutants showed that the interaction between C-terminal Tyr208 and Tyr13 localized in the first α-helix of the photoprotein is important for the stabilization and proper orientation of the oxygenated coelenterazine adduct within the internal cavity as well as for supporting the closed photoprotein conformation. We also suggest that the interplay between Tyr residues in ctenophore photoproteins occurs rather through the π-π interaction of their phenyl rings than through hydrogen bonds as in hydromedusan photoproteins.

摘要

发光蛋白 berovin 对光敏感,是栉水母 Beroe abyssicola 生物发光的原因。它与水螅水母发光蛋白有许多共同特性,尽管其氨基酸序列与发光蛋白的同源性较低。水螅水母发光蛋白 N 端 α-螺旋中 C 端 Pro 和 Arg 之间存在氢键,支持结合 2-羟过氧腔肠素的发光蛋白分子内腔的封闭构象。C 端和 N 端氢键网络对于将发光蛋白活性位点与溶剂适当隔离并提供生物发光反应的高量子产率是必要的。为了找出 berovin 残基的功能,我们通过替换或删除各种氨基酸残基来修饰蛋白的 N 端和 C 端。对 berovin 突变体的研究表明,C 端 Tyr208 和 Tyr13 与蛋白第一 α-螺旋之间的相互作用对于稳定和正确定向氧合腔肠素加合物在内部空腔内的位置以及支持封闭的发光蛋白构象很重要。我们还提出,栉水母发光蛋白中 Tyr 残基的相互作用是通过它们的苯环的 π-π 相互作用而不是通过氢键来实现的,这与水螅水母发光蛋白不同。

相似文献

1
The interaction of C-terminal Tyr208 and Tyr13 of the first α-helix ensures a closed conformation of ctenophore photoprotein berovin.第一α螺旋的 C 端 Tyr208 和 Tyr13 的相互作用确保了栉水母发光蛋白 berovin 的封闭构象。
Photochem Photobiol Sci. 2020 Mar 1;19(3):313-323. doi: 10.1039/c9pp00436j. Epub 2020 Feb 14.
2
Spatial structure of the novel light-sensitive photoprotein berovin from the ctenophore Beroe abyssicola in the Ca(2+)-loaded apoprotein conformation state.来自深海栉水母Beroe abyssicola的新型光敏感光蛋白berovin在Ca(2+)负载的脱辅基蛋白构象状态下的空间结构。
Biochim Biophys Acta. 2013 Oct;1834(10):2139-46. doi: 10.1016/j.bbapap.2013.07.006. Epub 2013 Jul 25.
3
The light-sensitive photoprotein berovin from the bioluminescent ctenophore Beroe abyssicola: a novel type of Ca(2+) -regulated photoprotein.发光水母中的光感发光蛋白 berovin:一种新型的 Ca(2+) 调节型发光蛋白。
FEBS J. 2012 Mar;279(5):856-70. doi: 10.1111/j.1742-4658.2012.08476.x. Epub 2012 Feb 10.
4
Recombinant light-sensitive photoprotein berovin from ctenophore Beroe abyssicola: Bioluminescence and absorbance characteristics.来自深水海鞘 Beroe abyssicola 的重组感光发光蛋白 berovin:生物发光和吸收特性。
Biochem Biophys Res Commun. 2022 Oct 8;624:23-27. doi: 10.1016/j.bbrc.2022.07.079. Epub 2022 Jul 22.
5
All Ca(2+)-binding loops of light-sensitive ctenophore photoprotein berovin bind magnesium ions: The spatial structure of Mg(2+)-loaded apo-berovin.光敏栉水母光蛋白berovin的所有钙结合环均结合镁离子:镁离子负载的脱辅基berovin的空间结构。
J Photochem Photobiol B. 2016 Jan;154:57-66. doi: 10.1016/j.jphotobiol.2015.11.012. Epub 2015 Dec 2.
6
Role of certain amino acid residues of the coelenterazine-binding cavity in bioluminescence of light-sensitive Ca(2+)-regulated photoprotein berovin.腔肠素结合腔的某些氨基酸残基在光敏感的Ca(2+)调节光蛋白berovin生物发光中的作用
Photochem Photobiol Sci. 2016 May 11;15(5):691-704. doi: 10.1039/c6pp00050a. Epub 2016 Apr 27.
7
Unexpected Coelenterazine Degradation Products of Photoprotein Photoinactivation.意外的发光蛋白光致失活的腔肠素降解产物。
Org Lett. 2021 Sep 3;23(17):6846-6849. doi: 10.1021/acs.orglett.1c02410. Epub 2021 Aug 20.
8
Expression, Purification, and Determination of Sensitivity to Calcium Ions of Ctenophore Photoproteins.刺胞动物光保护蛋白的表达、纯化和钙离子敏感性测定。
Methods Mol Biol. 2024;2757:269-287. doi: 10.1007/978-1-0716-3642-8_12.
9
Reaction mechanism of the bioluminescent protein mnemiopsin1 revealed by X-ray crystallography and QM/MM simulations.X 射线晶体学和 QM/MM 模拟揭示的生物发光蛋白 mnemiopsin1 的反应机制。
J Biol Chem. 2019 Jan 4;294(1):20-27. doi: 10.1074/jbc.RA118.006053. Epub 2018 Nov 12.
10
Photoinactivation related dynamics of ctenophore photoproteins: Insights from molecular dynamics simulation under electric-field.栉水母光蛋白的光灭活相关动力学:电场下分子动力学模拟的见解
Biochem Biophys Res Commun. 2017 Aug 19;490(2):265-270. doi: 10.1016/j.bbrc.2017.06.034. Epub 2017 Jun 10.

本文引用的文献

1
Hydrogen-bond networks between the C-terminus and Arg from the first α-helix stabilize photoprotein molecules.C 端与首个α螺旋中的精氨酸之间的氢键网络稳定了光蛋白分子。
Photochem Photobiol Sci. 2014 Mar;13(3):541-7. doi: 10.1039/c3pp50369k. Epub 2014 Jan 27.