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第一α螺旋的 C 端 Tyr208 和 Tyr13 的相互作用确保了栉水母发光蛋白 berovin 的封闭构象。

The interaction of C-terminal Tyr208 and Tyr13 of the first α-helix ensures a closed conformation of ctenophore photoprotein berovin.

机构信息

Photobiology Laboratory, Institute of Biophysics SB RAS, Federal Research Center "Krasnoyarsk Science Center SB RAS", Krasnoyarsk, Russia.

出版信息

Photochem Photobiol Sci. 2020 Mar 1;19(3):313-323. doi: 10.1039/c9pp00436j. Epub 2020 Feb 14.

Abstract

Light-sensitive Ca-regulated photoprotein berovin is responsible for the bioluminescence of the ctenophore Beroe abyssicola. It shares many properties of hydromedusan photoproteins although the degree of identity of its amino acid sequence with those of photoproteins is low. There is a hydrogen bond between C-terminal Pro and Arg situated in the N-terminal α-helix of hydromedusan photoproteins that supports a closed conformation of the internal cavity of the photoprotein molecule with bound 2-hydroperoxycoelenterazine. The C- and N-terminal hydrogen bond network is necessary to properly isolate the photoprotein active site from the solvent and consequently to provide a high quantum yield of the bioluminescence reaction. In order to find out which berovin residues perform the same function we modified the N- and C-termini of the protein by replacing or deleting various amino acid residues. The studies on berovin mutants showed that the interaction between C-terminal Tyr208 and Tyr13 localized in the first α-helix of the photoprotein is important for the stabilization and proper orientation of the oxygenated coelenterazine adduct within the internal cavity as well as for supporting the closed photoprotein conformation. We also suggest that the interplay between Tyr residues in ctenophore photoproteins occurs rather through the π-π interaction of their phenyl rings than through hydrogen bonds as in hydromedusan photoproteins.

摘要

发光蛋白 berovin 对光敏感,是栉水母 Beroe abyssicola 生物发光的原因。它与水螅水母发光蛋白有许多共同特性,尽管其氨基酸序列与发光蛋白的同源性较低。水螅水母发光蛋白 N 端 α-螺旋中 C 端 Pro 和 Arg 之间存在氢键,支持结合 2-羟过氧腔肠素的发光蛋白分子内腔的封闭构象。C 端和 N 端氢键网络对于将发光蛋白活性位点与溶剂适当隔离并提供生物发光反应的高量子产率是必要的。为了找出 berovin 残基的功能,我们通过替换或删除各种氨基酸残基来修饰蛋白的 N 端和 C 端。对 berovin 突变体的研究表明,C 端 Tyr208 和 Tyr13 与蛋白第一 α-螺旋之间的相互作用对于稳定和正确定向氧合腔肠素加合物在内部空腔内的位置以及支持封闭的发光蛋白构象很重要。我们还提出,栉水母发光蛋白中 Tyr 残基的相互作用是通过它们的苯环的 π-π 相互作用而不是通过氢键来实现的,这与水螅水母发光蛋白不同。

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