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ezTrack 开源流水线在量化大鼠运动行为中的实现:与商业可用软件的比较。

Implementation of ezTrack open-source pipeline for quantifying rat locomotor behavior: Comparison to commercially available software.

机构信息

Department of Anatomy, Physiology, and Pharmacology, University of Saskatchewan, Saskatoon, SK, Canada.

Department of Anatomy, Physiology, and Pharmacology, University of Saskatchewan, Saskatoon, SK, Canada.

出版信息

Neurosci Lett. 2020 Apr 1;723:134839. doi: 10.1016/j.neulet.2020.134839. Epub 2020 Feb 14.

Abstract

Animal tracking software is an important tool to record and analyze locomotor activity during behavioral assays that provides considerable advantages over traditional manual scoring approaches (e.g., counting line crosses on a grid overlay or using a stopwatch to score time spent in regions of interest). Although several options are available to researchers, tracking software is often costly or requires advanced technical knowledge to operate efficiently. In this study, a free open-source behavioral tracking pipeline called ezTrack was compared to commercially available software for assessing rat locomotor behavior and time spent in regions of interest during elevated plus maze (EPM) and open field test (OFT) assays. ezTrack produced nearly identical results to the commercial software. Overall, these results suggest that ezTrack is a cost-effective approach to quantify some aspects of behavior in these tasks.

摘要

动物跟踪软件是记录和分析行为测定中运动活动的重要工具,与传统的手动评分方法相比具有很大的优势(例如,在网格覆盖上计算线交叉次数或使用秒表对感兴趣区域内花费的时间进行评分)。尽管研究人员有几种选择,但跟踪软件通常成本高昂或需要先进的技术知识才能高效运行。在这项研究中,比较了一种名为 ezTrack 的免费开源行为跟踪管道与商业上可用的软件,以评估高架十字迷宫 (EPM) 和旷场测试 (OFT) 测定中大鼠的运动行为和在感兴趣区域内花费的时间。ezTrack 产生的结果与商业软件几乎完全相同。总体而言,这些结果表明 ezTrack 是一种经济有效的方法,可以量化这些任务中某些行为方面的情况。

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