Tain Lu, Jiao Pengtao, Hou Lidan, Li Yun, Song Zhengyu, Liu Wenjun, Fan Wenhui, Sun Lei
Key Laboratory of Pathogenic Microbiology and Immunology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China.
University of Chinese Academy of Sciences, Beijing 100049, China.
Sheng Wu Gong Cheng Xue Bao. 2020 Jan 25;36(1):109-121. doi: 10.13345/j.cjb.190176.
The CRISPR/Cas9 gene editing technology directs Cas9 protein to recognize, bind and cleave the target site specifically by using artificial single-guide RNA (sgRNA), through non-homologous end joining or homologous end-recombinant repair mechanisms of cells, which can be engineered to knockout or knock-in of genomes. RIG-I is a pattern recognition receptor that recognizes the 5'-triphosphate-containing RNA in the cytoplasm and activates IRF3/7 and NF-κB by interacting with the downstream signaling molecule MAVS, thus initiating the expression of type I interferons and inflammatory factors. Previous studies found that influenza B virus (IBV) can up-regulate the expression of RIG-I. In the present study, to explore whether RIG-I is the major receptor for IBV to active the antiviral innate immune response and its effect on IBV replication, RIG-I gene in 293T cells was knocked out by CRISPR-Cas9 system, and a stable RIG-I knockout 293T (RIG-I(-/-) 293T) cell line was screened by puromycin pressure. The results of Western blotting showed that RIG-I was not expressed in this cell line after IBV or Sendai virus (SeV) infection, indicating that the RIG-I(-/-) 293T cell line was successfully constructed. The transcription levels of interferons, inflammatory factors and interferon-stimulated genes in RIG-I(-/-) 293T cells which were infected by IBV decreased significantly compared with those in wild-type 293T cells. Moreover, the phosphorylation of p65 and IRF3 were not detected in IBV or SeV infected RIG-I(-/-) 293T cells. It is indicated that the expression of cytokines mainly depends on the RIG-I-mediated signaling pathway at the early stage of IBV infection. Furthermore, the multi-step growth curves of IBV in the wild type and RIG-I(-/-) 293T cells showed that RIG-I inhibited the replication of IBV. Collectively, the RIG-I knockout 293T cell line was successfully constructed. We found that RIG-I is the main receptor for IBV to active the antiviral innate immune response and is critical for inhibiting IBV replication, which lays the foundation for further study of IBV infection mechanism.
CRISPR/Cas9基因编辑技术通过使用人工单导向RNA(sgRNA),引导Cas9蛋白特异性识别、结合并切割靶位点,通过细胞的非同源末端连接或同源末端重组修复机制,可对基因组进行编辑以实现敲除或敲入。RIG-I是一种模式识别受体,可识别细胞质中含5'-三磷酸的RNA,并通过与下游信号分子MAVS相互作用激活IRF3/7和NF-κB,从而启动I型干扰素和炎性因子的表达。先前的研究发现,乙型流感病毒(IBV)可上调RIG-I的表达。在本研究中,为探究RIG-I是否是IBV激活抗病毒固有免疫应答的主要受体及其对IBV复制的影响,利用CRISPR-Cas9系统敲除293T细胞中的RIG-I基因,并通过嘌呤霉素加压筛选出稳定的RIG-I敲除293T(RIG-I(-/-) 293T)细胞系。蛋白质免疫印迹结果显示,在IBV或仙台病毒(SeV)感染后,该细胞系中未表达RIG-I,表明成功构建了RIG-I(-/-) 293T细胞系。与野生型293T细胞相比,感染IBV的RIG-I(-/-) 293T细胞中干扰素、炎性因子和干扰素刺激基因的转录水平显著降低。此外,在感染IBV或SeV的RIG-I(-/-) 293T细胞中未检测到p65和IRF3的磷酸化。这表明在IBV感染早期,细胞因子的表达主要依赖于RIG-I介导的信号通路。此外,IBV在野生型和RIG-I(-/-) 293T细胞中的多步生长曲线表明,RIG-I可抑制IBV的复制。总体而言,成功构建了RIG-I敲除293T细胞系。我们发现RIG-I是IBV激活抗病毒固有免疫应答的主要受体,对抑制IBV复制至关重要,这为进一步研究IBV感染机制奠定了基础。