Glycoscience and Glycotechnology Research Group, Biotechnology Research Institute for Drug Discovery, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, Japan.
Precision System Science, Kamihongou, Matsudo, Chiba, Japan.
Curr Protoc Protein Sci. 2020 Mar;99(1):e103. doi: 10.1002/cpps.103.
Lectin is a biomolecule that recognizes a specific part of glycans and, thus, has been used widely as a probe for glycoprotein analysis. Owing to the wide repertoire in nature combined with the recent two decades of advances in microarray technology, the multiplexed use of lectins has been widely used for glycan profiling of endogenous proteins. Because protein glycosylation is recognized as being biologically important and is expected to be a reliable disease marker, lectin microarray analysis with highly sensitive detection has been used to discover disease-relevant glycosylation alterations. However, the conventional system is limited to research purposes; thus, its implementation in clinical settings is warranted. Here, we provide an automatic glycan profiling method using GlycoBIST. A unique array format is used for 10-plexed lectin-glycoprotein interaction analysis on 1-mm-sized beads, which are arranged vertically in a capillary-shaped plastic tip. Using a one-boxed autopipetting machine, the whole process (including interaction, washing, and detection) is performed automatically and serially, resulting in reproducible measurements. In this article, a typical method for glycan profiling of a purified glycoprotein and the fabrication of GlycoBIST tips is explained. © 2020 by John Wiley & Sons, Inc. Basic Protocol 1: Fabrication of a GlycoBIST tip Basic Protocol 2: Automatic profiling of a target glycoprotein using GlycoBIST.
凝集素是一种能够识别糖链特定部分的生物分子,因此被广泛用作糖蛋白分析的探针。由于其在自然界中的广泛存在,再加上近二十年来微阵列技术的进步,凝集素的多重使用已广泛应用于内源性蛋白质的聚糖分析。由于蛋白质糖基化被认为具有重要的生物学意义,并有望成为可靠的疾病标志物,因此采用高灵敏度检测的凝集素微阵列分析已被用于发现与疾病相关的糖基化改变。然而,传统系统仅限于研究目的;因此,有必要将其应用于临床环境。在这里,我们提供了一种使用 GlycoBIST 进行自动糖谱分析的方法。独特的阵列格式用于在 1 毫米大小的珠子上进行 10 重凝集素-糖蛋白相互作用分析,这些珠子垂直排列在毛细管形状的塑料尖端中。使用一个盒装自动移液机器人,整个过程(包括相互作用、洗涤和检测)可以自动连续进行,从而实现可重复的测量。在本文中,解释了一种用于纯化糖蛋白糖谱分析的典型方法和 GlycoBIST 尖端的制作。© 2020 年由 John Wiley & Sons, Inc. 基本方案 1:GlycoBIST 尖端的制作 基本方案 2:使用 GlycoBIST 自动分析目标糖蛋白。