Chongqing Engineering Laboratory of Nanomaterials & Sensor Technologies, College of Chemistry and Chemical Engineering, Southwest University, Chongqing, 400715, China.
Institute of Materials Science & Devices, Suzhou University of Science and Technology, Suzhou, 215009, Jiangsu, China.
Anal Bioanal Chem. 2020 Apr;412(11):2455-2463. doi: 10.1007/s00216-020-02458-2. Epub 2020 Feb 20.
The reduced graphene oxide (rGO) could strongly adsorb and quench the fluorescence of dye-labeled single-stranded DNA (ssDNA); thus, it is widely applied in fluorescent sensors. However, these sensors may suffer from a limited sensitivity due to the low fluorescence recovery when adding the complementary DNA (cDNA) sequence. In this work, the powerful DNA branched junctions were constructed to improve the fluorescence recovery of FAM-labeled probe on rGO. In the presence of target Pb, the ribonucleotide (rA) in the substrate was cleaved specifically and the catalytic hairpin assembly of three metastable hairpins was further initiated, accompanied by the formation of DNA branched junctions. Then, the liberated Pb could be recyclable. Impressively, the DNA branched junctions not only hybridize with the FAM-labeled probes with a high efficiency, but also are significantly undesirable for the rGO. Thus, a high fluorescence recovery of FAM-labeled probe on rGO was expected. The integration of the high fluorescence recovery and dual-cycle signal amplification endows the sensing strategy with a good performance for Pb detection, including low detection limit (0.17 nM), good selectivity, and satisfactory practical applicability. The proposed DNA branched junctions offer a novel avenue to improve the fluorescence recovery of the dye-labeled probes on rGO for biological analysis.
还原氧化石墨烯(rGO)可以强烈吸附并猝灭染料标记的单链 DNA(ssDNA)的荧光;因此,它被广泛应用于荧光传感器中。然而,由于添加互补 DNA(cDNA)序列时荧光恢复较低,这些传感器的灵敏度可能会受到限制。在这项工作中,构建了强大的 DNA 分支结以提高 FAM 标记探针在 rGO 上的荧光恢复。在存在靶标 Pb 的情况下,底物中的核糖核苷酸(rA)被特异性切割,进一步引发三稳定发夹的催化发夹组装,同时形成 DNA 分支结。然后,释放的 Pb 可以回收。令人印象深刻的是,DNA 分支结不仅与 FAM 标记的探针具有高效的杂交,而且对 rGO 也非常不利。因此,可以预期 rGO 上 FAM 标记探针的高荧光恢复。高荧光恢复和双循环信号放大的集成赋予了用于 Pb 检测的传感策略良好的性能,包括低检测限(0.17 nM)、良好的选择性和令人满意的实际适用性。所提出的 DNA 分支结为提高 rGO 上染料标记探针的荧光恢复提供了一种新途径,可用于生物分析。