Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 16/10 Miklukho-Maklaya, Moscow, 117997, Russian Federation.
Semiotik LLC, 16/10 Miklukho-Maklaya, Moscow, 117997, Russian Federation; National Medical Research Center for Obstetrics, Gynecology and Perinatology Named after Academician V.I. Kulakov of the Ministry of Healthcare of Russian Federation, Moscow 117997, Russian Federation; Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow 119991, Russian Federation.
Mol Immunol. 2020 Apr;120:74-82. doi: 10.1016/j.molimm.2020.02.005. Epub 2020 Feb 19.
To understand the role of human natural IgM known as antibodies against the carbohydrate epitope Tn, the antibodies were isolated using GalNAcα-Sepharose affinity chromatography, and their specificity was profiled using microarrays (a glycan array printed with oligosaccharides and bacterial polysaccharides, as well as a glycopeptide array), flow cytometry, and inhibition ELISA. The antibodies bound a restricted number of GalNAcα-terminated oligosaccharides better than the parent monosaccharide, e.g., 6-O-Su-GalNAcα and GalNAcα1-3Galβ1-3(4)GlcNAcβ. The binding with several bacterial polysaccharides that have no structural resemblance to the affinity ligand GalNAcα was quite unexpected. Given that GalNAcα is considered the key fragment of the Tn antigen, it is surprising that these antibodies bind weakly GalNAcα-OSer and do not bind a wide variety of GalNAcα-OSer/Thr-containing mucin glycopeptides. At the same time, we have observed specific binding to cells having Tn-positive glycoproteins containing similar glycopeptide motifs in a conformationally rigid macromolecule. Thus, specific recognition of the Tn antigen apparently requires that the naturally occurring "anti-Tn" IgM recognize a complex epitope comprising the GalNAcα as an essential component and a fairly long amino acid sequence where the amino acids adjacent to GalNAcα do not contact the antibody paratope; i.e., the antibodies recognize a spatial epitope or a molecular pattern rather than a classical continuous sequence. In addition, we have not found any increase in the binding of natural antibodies when GalNAcα residues were clustered. These results may help in further development of anticancer vaccines based on synthetic Tn constructs.
为了了解人类天然 IgM(即针对碳水化合物表位 Tn 的抗体)的作用,使用 GalNAcα-Sepharose 亲和层析法分离抗体,并使用微阵列(糖基化阵列,该阵列打印有寡糖和细菌多糖,以及糖肽阵列)、流式细胞术和抑制 ELISA 来分析其特异性。这些抗体与数量有限的 GalNAcα 末端寡糖结合的能力优于母体单糖,例如 6-O-Su-GalNAcα 和 GalNAcα1-3Galβ1-3(4)GlcNAcβ。与没有结构相似性的亲和力配体 GalNAcα 的几种细菌多糖结合的能力令人意外。考虑到 GalNAcα 被认为是 Tn 抗原的关键片段,这些抗体与弱结合 GalNAcα-OSer 且不结合各种 GalNAcα-OSer/Thr 含有粘蛋白糖肽结合的能力令人惊讶。同时,我们观察到与含有类似糖肽模体的 Tn 阳性糖蛋白的细胞特异性结合,这些糖蛋白在构象刚性大分子中。因此,天然“抗-Tn”IgM 显然需要特异性识别包含 GalNAcα 作为必需成分的复杂表位,以及相当长的氨基酸序列,其中与 GalNAcα 相邻的氨基酸不与抗体结合;即,抗体识别空间表位或分子模式,而不是经典的连续序列。此外,当 GalNAcα 残基聚集时,我们没有发现天然抗体结合增加。这些结果可能有助于进一步开发基于合成 Tn 构建体的抗癌疫苗。