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在肽中引入顺序的氮杂氨基酸单元会诱导重复的β-转角和螺旋构象。

Introducing sequential aza-amino acids units induces repeated β-turns and helical conformations in peptides.

机构信息

Université Paris-Saclay, CNRS, BioCIS, 92290 Châtenay-Malabry, France.

出版信息

Org Biomol Chem. 2020 May 14;18(18):3452-3458. doi: 10.1039/c9ob02654a. Epub 2020 Feb 24.

Abstract

A major current issue in medicinal chemistry is the design of small peptide analogues resistant to proteolysis and able to adopt preferential conformations, while preserving the selectivity and efficiency of natural peptides. Whereas the introduction of one aza-Gly in peptides has proven numerous biological and structural interest, the conformational effect of sequential aza-Gly or aza-amino acids bearing side chains has not been investigated. In this work, experimental NMR and X-ray data together with in silico conformational studies reveal that the introduction of two consecutive aza-amino acids in pseudotripeptides induces the formation of stable hydrogen-bonded β-turn structures. Notably, this stabilization effect relies on the presence of side chains on aza-amino acids, as more flexible conformations are observed with aza-Gly residues. Remarkably, a longer aza/aza/α/aza/aza/α pseudohexapeptide containing substituted aza-amino acids adopts repeated β-turns conformations which interconvert with a fully helical structure mimicking a 3 helix.

摘要

当前药物化学领域的一个主要问题是设计对蛋白水解具有抗性且能够采取优先构象的小肽类似物,同时保留天然肽的选择性和效率。虽然在肽中引入一个氮杂甘氨酸已被证明具有许多生物学和结构上的意义,但侧链带有氮杂氨基酸或氮杂氨基酸的顺序的构象效应尚未得到研究。在这项工作中,实验 NMR 和 X 射线数据以及计算机构象研究表明,在假三肽中引入两个连续的氮杂氨基酸会诱导形成稳定的氢键β-转角结构。值得注意的是,这种稳定化效应依赖于氮杂氨基酸侧链的存在,因为带有氮杂甘氨酸残基的构象更具柔性。值得注意的是,含有取代氮杂氨基酸的更长的氮杂/氮杂/α/氮杂/氮杂/α 假六肽采用重复的β-转角构象,其与完全螺旋结构相互转化,模拟 3 螺旋。

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