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17β-雌二醇暴露对雌性大型溞(Daphnia magna)转录组的影响。

Transcriptome alterations in female Daphnia (Daphnia magna) exposed to 17β-estradiol.

机构信息

Freshwater Fisheries Research Center, Chinese Academy of Fishery Sciences/Fishery Eco-Environment Monitoring Center of Lower Reaches of Yangtze River/Wuxi Fishery College, Nanjing Agricultural University, Ministry of Agriculture/Laboratory of Quality & Safety Risk Assessment for Aquatic Products on Environmental Factors(Wuxi), Ministry of Agriculture, Wuxi, Jiangsu, 214081, China.

Agriculture Ministry Key Laboratory of Healthy Freshwater Aquaculture, Key Laboratory of Freshwater Aquaculture Genetic and Breeding of Zhejiang Province, Zhejiang Institute of Freshwater Fisheries, Huzhou, 313001, China.

出版信息

Environ Pollut. 2020 Jun;261:114208. doi: 10.1016/j.envpol.2020.114208. Epub 2020 Feb 19.

Abstract

The molecular mechanism of evaluating 17β-estradiol (E)-induced toxicity in female Daphnia magna has not been determined. In this study, the transcriptome of D. magna was analyzed after exposure to three different concentrations (0, 10, and 100 ng L) of E at 3, 6, and 12 h. The results showed 351-17,221 significantly up-regulated and 505-10,282 significantly down-regulated genes (P < 0.05). Overall, the selected largest 10,282 (10 ng Lvs control at 12 h) down-regulated and 17,221 (100 vs 10 ng L) up-regulated genes were identified; following annotation, pathways in cancer and RNA transport were found to be enriched according to the interaction network. Among all completed comparisons, KEGG pathways related to the immune system, cancer, disease infection, and active compound metabolism were identified by short time series expression miner analysis. A different set of genes fluctuated in a "U"-shaped pattern over time and at different concentrations of E, whereas some genes associated with disintoxication showed a reverse "U"-shaped response as E administration was increased. These results suggest that E exposure caused transcriptional changes in the immune system, disintoxication, disease prevention, and the protein degradation pathway.

摘要

目前尚未确定评估 17β-雌二醇(E)对雌性大型溞(Daphnia magna)毒性的分子机制。本研究在 3、6 和 12 h 时,分别用 0、10 和 100 ng/L 三种不同浓度的 E 处理大型溞后,分析其转录组。结果表明,有 351-17221 个基因显著上调,有 505-10282 个基因显著下调(P<0.05)。总体而言,选择最大的 10282 个(10 ng/L 在 12 h 时与对照组相比)下调和 17221 个(100 与 10 ng/L 相比)上调基因进行鉴定;根据互作网络,注释后发现癌症和 RNA 转运途径富集。在所有完成的比较中,通过短时间序列表达 miner 分析,鉴定到与免疫系统、癌症、疾病感染和活性化合物代谢相关的 KEGG 途径。在不同的时间点和不同浓度的 E 处理下,不同的基因集呈“U”型波动,而一些与解毒相关的基因随着 E 给药的增加呈反向“U”型反应。这些结果表明,E 暴露引起了免疫系统、解毒、疾病预防和蛋白质降解途径的转录变化。

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