CNRS, Centre de Recherches sur les Macromolécules Végétales, University Grenoble Alpes, Domaine universitaire, 38041 Grenoble, France.
Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky Str. 2/31, P.O. Box 420111 Kazan, Russia.
Glycobiology. 2020 May 19;30(6):396-406. doi: 10.1093/glycob/cwz106.
Mono- and digalactosyldiacylglycerol are essential galactolipids for the biogenesis of plastids and functioning of the photosynthetic machinery. In Arabidopsis, the first step of galactolipid synthesis is catalyzed by monogalactosyldiacylglycerol synthase 1 (MGD1), a monotopic protein located in the inner envelope membrane of chloroplasts, which transfers a galactose residue from UDP-galactose to diacylglycerol (DAG). MGD1 needs anionic lipids such as phosphatidylglycerol (PG) to be active, but the mechanism by which PG activates MGD1 is still unknown. Recent studies shed light on the catalytic mechanism of MGD1 and on the possible PG binding site. Particularly, Pro189 was identified as a potential residue implicated in PG binding and His155 as the putative catalytic residue. In the present study, using a multifaceted approach (Langmuir membrane models, atomic force microscopy, molecular dynamics; MD), we investigated the membrane binding properties of native MGD1 and mutants (P189A and H115A). We demonstrated that both residues are involved in PG binding, thus suggesting the existence of a PG-His catalytic dyad that should facilitate deprotonation of the nucleophile hydroxyl group of DAG acceptor. Interestingly, MD simulations showed that MGD1 induces a reorganization of lipids by attracting DAG molecules to create an optimal platform for binding.
单半乳糖二酰基甘油和双半乳糖二酰基甘油是质体生物发生和光合作用机制功能所必需的半乳糖脂。在拟南芥中,半乳糖脂合成的第一步由单半乳糖二酰基甘油合成酶 1(MGD1)催化,MGD1 是一种位于叶绿体内膜的单拓扑蛋白,它将半乳糖残基从 UDP-半乳糖转移到二酰基甘油(DAG)上。MGD1 需要阴离子脂质,如磷脂酰甘油(PG)才能发挥活性,但 PG 激活 MGD1 的机制尚不清楚。最近的研究揭示了 MGD1 的催化机制和可能的 PG 结合位点。特别是,脯氨酸 189 被鉴定为参与 PG 结合的潜在残基,组氨酸 155 被鉴定为假定的催化残基。在本研究中,我们使用多种方法(Langmuir 膜模型、原子力显微镜、分子动力学;MD)研究了天然 MGD1 及其突变体(P189A 和 H115A)的膜结合特性。我们证明这两个残基都参与 PG 结合,因此表明存在 PG-组氨酸催化二联体,这应该有助于 DAG 受体亲核羟基的去质子化。有趣的是,MD 模拟表明,MGD1 通过吸引 DAG 分子来创建最佳结合平台,从而引起脂质的重新排列。