Department of Electrical and Computer Engineering, National University of Singapore, 117 583, Singapore.
Research and Development Centre, Bharathiar University, Coimbatore 641 046, Tamil Nadu, India; Department of Chemistry, Thiruvalluvar Arts and Science College, Kurinjipadi 607 302, Tamil Nadu, India.
Spectrochim Acta A Mol Biomol Spectrosc. 2020 May 5;232:118166. doi: 10.1016/j.saa.2020.118166. Epub 2020 Feb 19.
A newly synthesized molecular complex 3-chloro-3-methyl-2,6-diphenylpiperidin-4-one [CMDP] crystallizes in the triclinic space group P1. The piperidin-4-one ring exhibits a distorted chair conformation with the puckering parameters Q = 0.559 (3) Å, θ = 173.3 (3°) and φ = 180 (2°). The methyl substituent on the third position of the piperidine ring takes up a syn-periplanar positioning although the chloro substituent takes up an anti-clinical positioning with dihedral angle: Cl1-C2-C1-O1 = 113.3 (2°) due to the repulsion from an adjacent oxygen atom. The optimized molecular geometry and fundamental vibrational frequencies of the CMDP compounds are interpreted with the help of normal coordinate force field calculations based on DFT method B3LYP/6-31+G (d,p) level basis set. The HOMO-LUMO energy gap of the molecule is 5.4194 eV. The hardness value (η) of the CMDP molecule is 2.7097 eV. Hirshfeld surface analysis and fingerprint plots are supportive for determining the molecular shape and visually analyzing the intermolecular interactions in the crystal structure. The Hirshfeld surfaces like ddd, shape index and curvedness of CHNOCl were pictured and discussed. The various levels of electronic transitions have been predicted by Time-Dependent Density Functional Theory (TD-DFT) calculations and compared with the recorded absorption spectrum. Molecular docking study was performed and reported for the synthesized compound against 4ey7 protein.
一种新合成的分子配合物 3-氯-3-甲基-2,6-二苯基哌啶-4-酮 [CMDP] 结晶于三斜空间群 P1。哌啶-4-酮环呈现出扭曲的椅式构象,其翘曲参数 Q = 0.559(3)Å,θ = 173.3(3°)和φ = 180(2°)。尽管氯取代基采用反临床定位,与二面角:Cl1-C2-C1-O1 = 113.3(2°),但由于来自相邻氧原子的排斥,哌啶环上第三个位置的甲基取代基采用了顺式并置定位。借助于基于 DFT 方法 B3LYP/6-31+G(d,p)水平基组的正则坐标力场计算,解释了 CMDP 化合物的优化分子几何形状和基本振动频率。分子的 HOMO-LUMO 能隙为 5.4194 eV。CMDP 分子的硬度值(η)为 2.7097 eV。Hirshfeld 表面分析和指纹图有助于确定分子形状,并直观地分析晶体结构中的分子间相互作用。描绘和讨论了 CHNOCl 的 ddd、形状指数和曲率等 Hirshfeld 表面。通过时间相关密度泛函理论(TD-DFT)计算预测了各种水平的电子跃迁,并与记录的吸收光谱进行了比较。对合成化合物进行了针对 4ey7 蛋白的分子对接研究,并进行了报道。