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全基因组相互作用研究揭示了哮喘患者对吸入性皮质类固醇反应性的年龄依赖性决定因素。

Genome-wide interaction study reveals age-dependent determinants of responsiveness to inhaled corticosteroids in individuals with asthma.

机构信息

Channing Division of Network Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts, United States of America.

Department of Population Medicine, PRecisiOn Medicine Translational Research (PROMoTeR) Center, Harvard Medical School and Harvard Pilgrim Health Care Institute, Boston, Massachusetts, United States of America.

出版信息

PLoS One. 2020 Mar 2;15(3):e0229241. doi: 10.1371/journal.pone.0229241. eCollection 2020.

Abstract

While genome-wide association studies have identified genes involved in differential treatment responses to inhaled corticosteroids (ICS) in asthma, few studies have evaluated the potential effects of age in this context. A significant proportion of asthmatics experience exacerbations (hospitalizations and emergency department visits) during ICS treatment. We evaluated the interaction of genetic variation and age on ICS response (measured by the occurrence of exacerbations) through a genome-wide interaction study (GWIS) of 1,321 adult and child asthmatic patients of European ancestry. We identified 107 genome-wide suggestive (P<10-05) age-by-genotype interactions, two of which also met genome-wide significance (P<5x10-08) (rs34631960 [OR 2.3±1.6-3.3] in thrombospondin type 1 domain-containing protein 4 (THSD4) and rs2328386 [OR 0.5±0.3-0.7] in human immunodeficiency virus type I enhancer binding protein 2 (HIVEP2)) by joint analysis of GWIS results from discovery and replication populations. In addition to THSD4 and HIVEP2, age-by-genotype interactions also prioritized genes previously identified as asthma candidate genes, including DPP10, HDAC9, TBXAS1, FBXL7, and GSDMB/ORMDL3, as pharmacogenomic loci as well. This study is the first to link these genes to a pharmacogenetic trait for asthma.

摘要

虽然全基因组关联研究已经确定了与吸入性皮质类固醇(ICS)治疗哮喘反应差异相关的基因,但很少有研究评估年龄在这方面的潜在影响。相当一部分哮喘患者在 ICS 治疗期间会出现恶化(住院和急诊就诊)。我们通过对 1321 名欧洲血统的成年和儿童哮喘患者进行全基因组交互研究(GWIS),评估了遗传变异和年龄对 ICS 反应(通过恶化发生来衡量)的相互作用。我们确定了 107 个全基因组提示性(P<10-05)的年龄-基因型相互作用,其中两个也达到了全基因组显著性(P<5x10-08)(rs34631960 [OR 2.3±1.6-3.3]在血栓素样蛋白 1 域包含蛋白 4(THSD4)和 rs2328386 [OR 0.5±0.3-0.7]在人类免疫缺陷病毒 I 型增强子结合蛋白 2(HIVEP2)),通过对发现和复制人群的 GWIS 结果进行联合分析。除了 THSD4 和 HIVEP2,年龄-基因型相互作用还优先考虑了先前被确定为哮喘候选基因的基因,包括 DPP10、HDAC9、TBXAS1、FBXL7 和 GSDMB/ORMDL3,作为药物基因组学基因座。这项研究首次将这些基因与哮喘的药物遗传学特征联系起来。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0c2f/7051058/a7a62c2a2222/pone.0229241.g001.jpg

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