基于深度学习的尿液可见成分检测

Inspection of visible components in urine based on deep learning.

作者信息

Li Qiaoliang, Yu Zhigang, Qi Tao, Zheng Lei, Qi Suwen, He Zhuoying, Li Shiyu, Guan Huimin

机构信息

Department of Biomedical Engineering, ShenZhen University, ShenZhen, 518000, China.

Department of Laboratory Medicine, Nangfang Hospital, Southern Medical University, GuangDong, 510515, China.

出版信息

Med Phys. 2020 Jul;47(7):2937-2949. doi: 10.1002/mp.14118. Epub 2020 May 14.

Abstract

PURPOSE

Urinary particles are particularly important parameters in clinical urinalysis, especially for the diagnosis of nephropathy. Therefore, it is highly important to precisely detect urinary particles in the clinical setting. However, artificial microscopy is subjective and time consuming, and various previous detection algorithms lack the adequate accuracy. In this study, a method is proposed for the analysis of urinary particles based on deep learning.

METHODS

We used seven cellular components (i.e., erythrocytes, leukocytes, epithelial, low-transitional epithelium, casts, crystal, and squamous epithelial cells) in the microscopic imaging of urine as the detection targets. After the extraction of features using Resnet50, feature maps of different sizes are obtained in the last few layers of the feature pyramid net (FPN). The feature maps are then input into the classification subnetwork and regression subnetwork for classification and localization respectively, and detection results are obtained. First, we introduce the basic model (RetinaNet) to detect the cellular components in urinary particles, and the features of the objects can then be extracted more effectively by replacing different basic networks. Lastly, the effects of different weight initialization methods and different anchor scales on the performance of the model are investigated.

RESULTS

We obtained the optimal network structure based on the adjustment of the loss functional parameters, thereby achieving the best results in the test set of urinary particles. The experimental data yielded an accuracy of 88.65% with a processing time of only 0.2 s for each image on a GeForce GTX 1080 graphics processing unit (GPU). Our results demonstrate that this method cannot only achieve the speed of the first-stage target detector, but also the accuracy of the two-stage target algorithm in the analysis of urinary particles.

CONCLUSION

This study developed new automated analysis urinary particles based on deep learning, and this method is expected to be used for the automated analysis and detection of urinary particles. Moreover, our approach will be useful for the detection of other cells in the clinical setting.

摘要

目的

尿颗粒是临床尿液分析中的重要参数,对肾病诊断尤为重要。因此,在临床环境中精确检测尿颗粒至关重要。然而,人工显微镜检查主观且耗时,以往的各种检测算法准确性不足。本研究提出一种基于深度学习的尿颗粒分析方法。

方法

我们将尿液显微镜图像中的七种细胞成分(即红细胞、白细胞、上皮细胞、低移行上皮细胞、管型、晶体和鳞状上皮细胞)作为检测目标。使用Resnet50提取特征后,在特征金字塔网络(FPN)的最后几层获得不同大小的特征图。然后将特征图分别输入分类子网和回归子网进行分类和定位,得到检测结果。首先,引入基本模型(RetinaNet)检测尿颗粒中的细胞成分,然后通过替换不同的基本网络更有效地提取目标特征。最后,研究不同权重初始化方法和不同锚点尺度对模型性能的影响。

结果

通过调整损失函数参数,我们获得了最优网络结构,从而在尿颗粒测试集中取得了最佳结果。在GeForce GTX 1080图形处理单元(GPU)上,实验数据的准确率为88.65%,每张图像的处理时间仅为0.2秒。我们的结果表明,该方法在尿颗粒分析中不仅能达到一级目标检测器的速度,还能达到二级目标算法的准确性。

结论

本研究开发了基于深度学习的新型尿颗粒自动分析方法,该方法有望用于尿颗粒的自动分析和检测。此外,我们的方法将有助于临床环境中其他细胞的检测。

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