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氟-19 NMR 光谱法研究三肽菌素的氟化类似物突出了 Tyr 残基在抗菌肽中的独特作用。

Fluorine-19 NMR spectroscopy of fluorinated analogs of tritrpticin highlights a distinct role for Tyr residues in antimicrobial peptides.

机构信息

Biochemistry Research Group, Department of Biological Sciences, University of Calgary, 2500 University Dr. NW, Calgary, Alberta T2N 1N4, Canada.

Structural Biology Initiative, Advanced Science Research Center, The City University of New York, 85 St. Nicholas Terrace, New York, NY 10031, USA.

出版信息

Biochim Biophys Acta Biomembr. 2020 Jun 1;1862(6):183260. doi: 10.1016/j.bbamem.2020.183260. Epub 2020 Mar 4.

Abstract

Because of their potential as novel antibiotic agents, antimicrobial peptides (AMPs) have generated considerable interest. The mechanism of bacterial toxicity of AMPs often involves the disruption and/or permeabilization of the bacterial membrane; even those that act intracellularly first have to traverse the membrane. In this work we have explored the incorporation of the fluorinated aromatic amino acids fluoro-Phe and fluoro-Tyr into the Trp- and Arg-rich AMP tritrpticin, and investigated their role in the membrane binding properties and the antimicrobial activity of the peptide. Fluorinated peptides were obtained with good yield by recombinant expression of tritrpticin as a calmodulin-fusion protein in Escherichia coli. Cells were grown in the presence of glyphosate, an inhibitor of aromatic amino acid biosynthesis, and the peptides were released by proteolysis from the purified fusion protein. By using SDS micelles, as a simplified model of the bacterial cytoplasmic membrane, we could study the peptide-membrane interactions and the preferred location of individual fluorinated residues in the micelles by F NMR spectroscopy. Solvent-perturbation F NMR measurements revealed that para-fluoro-Phe residues are embedded deeply in the hydrophobic region of the micelles. On the other hand, 3-fluoro-Tyr residues introduced in tritrpticin were located near the surface of the micelles with high solvent exposure, while 2-fluoro-Tyr sidechains were less solvent exposed. In combination with the outcome of determinations of their antimicrobial activity, our F NMR results indicate that the higher solvent exposure of Tyr residues correlates with a decrease of the antimicrobial potency. This different role of Tyr can likely be extended from tritrpticin to other cationic AMPs.

摘要

由于其作为新型抗生素的潜力,抗菌肽(AMPs)引起了相当大的关注。AMPs 对细菌的毒性机制通常涉及破坏和/或细菌膜的通透性;即使那些在细胞内起作用的 AMP 首先也必须穿过膜。在这项工作中,我们探索了将氟化芳香族氨基酸氟苯丙氨酸和氟酪氨酸掺入富含色氨酸和精氨酸的 AMP 三肽中,并研究了它们在肽的膜结合特性和抗菌活性中的作用。通过在大肠杆菌中以钙调蛋白融合蛋白的形式重组表达三肽,用良好的产率获得了氟化肽。在存在草甘膦(一种芳香族氨基酸生物合成抑制剂)的情况下培养细胞,并从纯化的融合蛋白中通过蛋白水解释放肽。通过使用 SDS 胶束作为细菌细胞质膜的简化模型,我们可以通过 F NMR 光谱研究肽-膜相互作用以及单个氟化残基在胶束中的优先位置。溶剂扰动 F NMR 测量结果表明,对氟苯丙氨酸残基深深地嵌入胶束的疏水区。另一方面,在三肽中引入的 3-氟酪氨酸残基位于胶束表面附近,具有高溶剂暴露度,而 2-氟酪氨酸侧链的溶剂暴露度较低。结合它们的抗菌活性测定结果,我们的 F NMR 结果表明,Tyr 残基的更高溶剂暴露度与抗菌效力的降低相关。这种 Tyr 的不同作用可能从三肽扩展到其他阳离子 AMP。

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