Department of Chemistry, Yonsei University, Seoul, 03722, Republic of Korea.
Angew Chem Int Ed Engl. 2020 Jun 22;59(26):10441-10445. doi: 10.1002/anie.202002657. Epub 2020 Apr 7.
As a synthetic model for intra-protein interactions that reinforce binding affinities between proteins and ligands, the energetic interplay of binding and folding was investigated using foldamer-based receptors capable of adopting helical structures. The receptors were designed to have identical hydrogen-bonding sites for anion binding but different aryl appendages that simply provide additional π-stacking within the helical backbones without direct interactions with the bound anions. In particular, the presence of electron-deficient aryl appendages led to dramatic enhancements in the association constant between the receptor and chloride or nitrate ions, by up to three orders of magnitude. Extended stacking within the receptor contributes to the stabilization of the entire folding structure of complexes, thereby enhancing binding affinities.
作为一种增强蛋白质与配体之间结合亲和力的蛋白质内相互作用的合成模型,使用能够采用螺旋结构的基于折叠体的受体研究了结合和折叠的能量相互作用。这些受体被设计为具有相同的阴离子结合氢键位点,但不同的芳基取代基,这些取代基仅在螺旋骨架内提供额外的π堆积,而与结合的阴离子没有直接相互作用。特别地,缺电子芳基取代基的存在导致受体与氯离子或硝酸根离子之间的结合常数显著增强,可达三个数量级。受体内部的扩展堆积有助于稳定配合物的整个折叠结构,从而增强结合亲和力。