School of Pharmacy, Shaanxi University of Chinese Medicine, Xianyang 712046, China.
Department of Nephrology, Shaanxi Hospital of Chinese Medicine, Xi'an 710003, China.
Comb Chem High Throughput Screen. 2020;23(8):775-787. doi: 10.2174/1386207323666200311113747.
Stroke is ranked second among diseases that cause mortality worldwide. Owing to its complicated pathogenesis, no satisfactory treatment strategies for stroke are available. Dachengqi decoction (DCQD), a traditional Chinese herbal medicine, has been widely used in China for a long time, as it has a good effect on stroke. However, the molecular mechanism underlying this effect of DCQD is unclear.
In the present study, we aimed to reveal and explore the multi-pathway and multi-gene regulatory molecular mechanism of Dachengqi decoction in the treatment of stroke.
In this study, a network pharmacology method, in combination with oral bioavailability prediction and drug-likeness evaluation, was employed to predict the active ingredients of DCQD. The target genes of the active components and the traced pathways related to these target genes were predicted. Gene Ontology (GO) enrichment and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were performed using clusterProfiler software package on the R platform and ClueGo+CluePedia plug-ins. Finally, the key DCQD targets were verified using the Gene Expression Omnibus (GEO) dataset.
According to the ADME model, 52 active components were screened from 296 active components of DCQD. After prediction and screening, 215 stroke-related targets were obtained and analyzed via GO and KEGG analyses. GO analysis showed that DCQD targets were mainly involved in the regulation of oxidative stress, lipid metabolism, inflammation, and other biological processes. KEGG pathway analysis further revealed pathways involved in stroke, such as arachidonic acid metabolic, HIF-1 signaling pathway, estrogen signaling pathway, MAPK signaling pathway, PI3K-Akt signaling pathway, platelet activation pathway, VEGF signaling pathway, and cAMP signaling pathway. Network analysis revealed that DCQD might be involved in the regulation of lipid metabolism, blood pressure, inflammation, angiogenesis, neuroprotection, platelet aggregation, apoptosis, and oxidation in stroke treatment. GEO dataset analysis showed that DCQD's therapeutic effects might be exerted via the bidirectional regulation principle.
Based on the methods of network pharmacology and GEO analysis, it was found that, during stroke treatment, DCQD regulates and controls multiple genes and multiple pathways in a synergistic manner, providing a new strategy for stroke treatment.
中风在全球导致死亡的疾病中排名第二。由于其发病机制复杂,目前尚无令人满意的中风治疗策略。大承气汤(DCQD)是一种传统的中药,在中国已经使用了很长时间,因为它对中风有很好的疗效。然而,DCQD 疗效的确切分子机制尚不清楚。
本研究旨在揭示和探讨大承气汤治疗中风的多途径、多基因调控分子机制。
本研究采用网络药理学方法,结合口服生物利用度预测和类药性评价,预测 DCQD 的活性成分。预测活性成分的靶基因及与这些靶基因相关的跟踪途径。使用 R 平台上的 clusterProfiler 软件包和 ClueGo+CluePedia 插件进行基因本体论(GO)富集和京都基因与基因组百科全书(KEGG)途径分析。最后,使用基因表达综合(GEO)数据集验证关键的 DCQD 靶点。
根据 ADME 模型,从 296 种 DCQD 活性成分中筛选出 52 种活性成分。经过预测和筛选,获得了 215 个与中风相关的靶点,并通过 GO 和 KEGG 分析进行了分析。GO 分析表明,DCQD 靶点主要参与氧化应激、脂质代谢、炎症等生物过程的调节。KEGG 途径分析进一步揭示了中风相关的途径,如花生四烯酸代谢、HIF-1 信号通路、雌激素信号通路、MAPK 信号通路、PI3K-Akt 信号通路、血小板激活通路、VEGF 信号通路和 cAMP 信号通路。网络分析表明,DCQD 可能参与中风的脂质代谢、血压、炎症、血管生成、神经保护、血小板聚集、细胞凋亡和氧化调节。GEO 数据集分析表明,DCQD 的治疗效果可能通过双向调节原理发挥作用。
基于网络药理学和 GEO 分析方法,发现 DCQD 在治疗中风时以协同方式调节和控制多个基因和多个途径,为中风治疗提供了新的策略。