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一种利用图像处理测量线虫大小的新方法。

A new method for measuring the size of nematodes using image processing.

作者信息

Andrews David G H

机构信息

School of Engineering, Technology and Design, Canterbury Christ Church University, North Holmes Road, Canterbury CT1 1QU, UK.

出版信息

Biol Methods Protoc. 2020 Jan 17;5(1):bpz020. doi: 10.1093/biomethods/bpz020. eCollection 2020.

Abstract

Many studies have been made on nematodes, especially , which are used as a model organism. In many studies, the size of the nematode is important. This article describes a method of measuring the length, volume and surface area of nematodes from photographs. The method uses the imaging software ImageJ, which is in the public domain. Two macros are described. The first converts the images into binary form, and the second uses several built-in functions to measure the length of the worm and its diameter along its length. If it is assumed that the worm has a circular cross-section, then the volume and surface area of the nematode can be calculated. This is a cheap and easy technique.

摘要

人们对线虫进行了许多研究,尤其是将其用作模式生物的研究。在许多研究中,线虫的大小很重要。本文介绍了一种从照片测量线虫长度、体积和表面积的方法。该方法使用的是公共领域的成像软件ImageJ。文中描述了两个宏。第一个宏将图像转换为二进制形式,第二个宏使用几个内置函数来测量线虫的长度及其沿长度方向的直径。如果假设线虫的横截面是圆形的,那么就可以计算出线虫的体积和表面积。这是一种既便宜又简便的技术。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6337/6994075/971f40db4be9/bpz020f1.jpg

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