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利用比较古老和法医 DNA 提取技术从严重烧伤的人类遗骸中重建完整和部分 STR 图谱。

Reconstructing full and partial STR profiles from severely burned human remains using comparative ancient and forensic DNA extraction techniques.

机构信息

School of Human Evolution and Social Change, Arizona State University, United States; Center for Evolution and Medicine, Arizona State University, United States.

Center for Bioarchaeological Research, Arizona State University, United States; Maricopa County Office of the Medical Examiner, Phoenix, AZ, United States; School of Mathematical and Natural Sciences, Arizona State University, United States.

出版信息

Forensic Sci Int Genet. 2020 May;46:102272. doi: 10.1016/j.fsigen.2020.102272. Epub 2020 Mar 4.

Abstract

Thermal degeneration of the DNA molecule presents a special challenge to medico-legal investigations since low DNA yields, fragmented DNA molecules, and damaged nucleotide bases hinder accurate STR genotyping. As a consequence, fragments of severely burned human remains are often not amenable to standard DNA recovery. However, current ancient DNA (aDNA) extraction methods have proven highly effective at obtaining ultrashort DNA fragments (∼50 bp) from degraded palaeontological and archaeological specimens. In this study, we compare DNA yields and STR results obtained from two established aDNA and forensic DNA extraction protocols by sampling multiple skeletal elements recovered from victims (n = 23) involved in fire-related incidents. DNA yields and STR results suggest an inverse correlation between DNA yield and STR quality and increasing temperature. Despite the rapid thermal destruction of DNA at high temperatures, we generated higher quality full and partial STR profiles using the aDNA extraction protocol across all burn categories than the forensic total bone demineralization extraction method. Our analysis suggests adopting aDNA extraction methods as an alternative to current forensic practices to improve DNA yields from challenging human remains.

摘要

DNA 分子的热变性给法医调查带来了特殊的挑战,因为低 DNA 产量、碎片化的 DNA 分子和受损的核苷酸碱基会阻碍准确的 STR 基因分型。因此,严重烧伤的人体遗骸碎片通常不适用于标准的 DNA 回收。然而,目前的古代 DNA(aDNA)提取方法已被证明非常有效地从退化的古生物学和考古学标本中获得超短 DNA 片段(约 50bp)。在这项研究中,我们通过对涉及火灾事故的多个骨骼样本进行采样,比较了两种已建立的 aDNA 和法医 DNA 提取方案的 DNA 产量和 STR 结果(n=23)。DNA 产量和 STR 结果表明,DNA 产量与 STR 质量和温度呈反比关系。尽管 DNA 在高温下迅速热降解,但我们使用 aDNA 提取方案在所有烧伤类别中生成的完整和部分 STR 图谱质量都高于法医全骨脱矿提取方法。我们的分析表明,采用 aDNA 提取方法作为替代当前法医实践的方法,可以提高从具有挑战性的遗骸中提取 DNA 的产量。

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