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人类与年龄相关的听力损失新候选基因:一项持续的挑战。

New age-related hearing loss candidate genes in humans: an ongoing challenge.

机构信息

Institute for Maternal and Child Health - IRCCS, Burlo Garofolo, Trieste, Italy.

Institute for Maternal and Child Health - IRCCS, Burlo Garofolo, Trieste, Italy; Department of Medicine, Surgery and Health Sciences, University of Trieste, Trieste, Italy.

出版信息

Gene. 2020 Jun 5;742:144561. doi: 10.1016/j.gene.2020.144561. Epub 2020 Mar 12.

DOI:10.1016/j.gene.2020.144561
PMID:32173538
Abstract

Age-related hearing loss (ARHL) is the most frequent sensory disorder in the elderly, affecting approximately one-third of people aged more than 65 years. Despite a large number of people affected, ARHL is still an area of unmet clinical needs, and only a few ARHL susceptibility genes have been detected so far. In order to further investigate the genetics of ARHL, we analyzed a series of 46 ARHL candidate genes, selected according to previous Genome Wide Association Studies (GWAS) data, literature updates and animal models, in a large cohort of 464 Italian ARHL patients. We have filtered the variants according to a) pathogenicity prediction, b) allele frequency in public databases, c) allele frequency in an internal cohort of 113 healthy matched controls, and 81 healthy semi-supercentenarians. After data analysis, all the variants of interest have been tested by functional "in silico" or "in vitro" experiments (i.e., molecular dynamics simulations and protein translation analysis) to assess their pathogenic role, and the expression of the mutated genes have been checked in mouse or zebrafish inner ear. This multi-step approach led to the characterization of a series of ultra-rare likely pathogenic variants in DCLK1, SLC28A3, CEP104, and PCDH20 genes, contributing to describe the first association of these genes with ARHL in humans. These results provide essential insights on the understanding of the molecular bases of such a complex, heterogeneous and frequent disorder, unveiling new possible targets for the future development of innovative therapeutic and preventive approaches that could improve the quality of life of the millions of people affected worldwide.

摘要

年龄相关性听力损失(ARHL)是老年人最常见的感觉障碍,影响了大约三分之一的 65 岁以上人群。尽管受影响的人数众多,但 ARHL 仍然是一个未满足临床需求的领域,迄今为止仅发现了少数几个 ARHL 易感基因。为了进一步研究 ARHL 的遗传学,我们根据先前的全基因组关联研究(GWAS)数据、文献更新和动物模型,分析了一系列 46 个 ARHL 候选基因,在一个由 464 名意大利 ARHL 患者组成的大队列中选择了这些基因。我们根据以下标准对变体进行了过滤:a)致病性预测,b)公共数据库中的等位基因频率,c)内部 113 名健康匹配对照和 81 名健康超百岁老人的队列中的等位基因频率。在数据分析之后,所有感兴趣的变体都通过功能“计算”或“体外”实验(即分子动力学模拟和蛋白质翻译分析)进行了测试,以评估它们的致病性作用,并检查了突变基因在小鼠或斑马鱼内耳中的表达。这种多步骤方法导致了 DCLK1、SLC28A3、CEP104 和 PCDH20 基因中一系列极罕见的可能致病性变体的特征化,这些基因与人类 ARHL 的首次关联。这些结果为理解这种复杂、异质和常见的疾病的分子基础提供了重要的见解,揭示了新的可能靶点,为未来开发创新的治疗和预防方法提供了可能,这些方法可以提高全球数百万人的生活质量。

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