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酵母模型中基因突变的致病效应。

Pathogenic Effect of Gene Mutations in a Yeast Model.

机构信息

Neuromuscular Unit, Mossakowski Medical Research Centre Polish Academy of Sciences, 02-106 Warsaw, Poland.

Institute of Biochemistry and Biophysics Polish Academy of Sciences, 02-106 Warsaw, Poland.

出版信息

Genes (Basel). 2020 Mar 14;11(3):310. doi: 10.3390/genes11030310.

DOI:10.3390/genes11030310
PMID:32183277
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7140815/
Abstract

The question of whether a newly identified sequence variant is truly a causative mutation is a central problem of modern clinical genetics. In the current era of massive sequencing, there is an urgent need to develop new tools for assessing the pathogenic effect of new sequence variants. In Charcot-Marie-Tooth disorders (CMT) with their extreme genetic heterogeneity and relatively homogenous clinical presentation, addressing the pathogenic effect of rare sequence variants within 80 CMT genes is extremely challenging. The presence of multiple rare sequence variants within a single CMT-affected patient makes selection for the strongest one, the truly causative mutation, a challenging issue. In the present study we propose a new yeast-based model to evaluate the pathogenic effect of rare sequence variants found within the one of the CMT-associated genes, . In our approach, the wild-type and pathogenic variants of human gene were expressed in yeast. Then, a growth rate and mitochondrial morphology and function of -expressing strains were studied. Also, the mutant GDAP1 proteins localization and functionality were assessed in yeast. We have shown, that was not only stably expressed but also functional in yeast cell, as it influenced morphology and function of mitochondria and altered the growth of a mutant yeast strain. What is more, the various pathogenic sequence variants caused the specific for them effect in the tests we performed. Thus, the proposed model is suitable for validating the pathogenic effect of known mutations and may be used for testing of unknown sequence variants found in CMT patients.

摘要

新鉴定的序列变异是否确实是致病突变,这是现代临床遗传学的一个核心问题。在当前大规模测序的时代,迫切需要开发新的工具来评估新序列变异的致病效应。在遗传性周围神经病(CMT)中,由于其遗传异质性极高,临床表型相对单一,因此评估 80 个 CMT 基因内罕见序列变异的致病效应极具挑战性。在单个 CMT 患者中存在多种罕见的序列变异,因此选择最强的、真正的致病突变是一个具有挑战性的问题。在本研究中,我们提出了一种新的基于酵母的模型,用于评估 CMT 相关基因之一 中发现的罕见序列变异的致病效应。在我们的方法中,野生型和致病性人类 基因变体在酵母中表达。然后,研究了 -表达菌株的生长速度和线粒体形态和功能。此外,还评估了酵母中突变 GDAP1 蛋白的定位和功能。我们已经表明, 不仅在酵母细胞中稳定表达,而且具有功能,因为它影响线粒体的形态和功能,并改变了突变酵母菌株的生长。更重要的是,各种 致病性序列变异在我们进行的测试中引起了特定的效应。因此,所提出的模型适合验证已知 突变的致病效应,并且可以用于测试 CMT 患者中发现的未知序列变异。

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Calcium Deregulation and Mitochondrial Bioenergetics in GDAP1-Related CMT Disease.钙失调与 GDAP1 相关的 CMT 疾病中的线粒体生物能学。
Int J Mol Sci. 2019 Jan 18;20(2):403. doi: 10.3390/ijms20020403.
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A role for the GDAP1 gene in the molecular pathogenesis of Charcot‑Marie‑Tooth disease.GDAP1基因在夏科-马里-图思病分子发病机制中的作用。
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Sphingolipid accumulation causes mitochondrial dysregulation and cell death.鞘脂积累导致线粒体失调和细胞死亡。
GDAP1 中保守的分子内网络与 CMT 相关突变和蛋白质稳定性密切相关。
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Validation of the Pathogenic Effect of Gene Mutations Based on Yeast Model.基于酵母模型验证基因突变的致病性。
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Yeast as a Model to Find New Drugs and Drug Targets for -Dependent Neurodegenerative Diseases.酵母作为寻找新型药物和靶点治疗 - 依赖性神经退行性疾病的模型。
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GDAP1 Involvement in Mitochondrial Function and Oxidative Stress, Investigated in a Charcot-Marie-Tooth Model of hiPSCs-Derived Motor Neurons.在人诱导多能干细胞衍生运动神经元的夏科-马里-图斯模型中研究GDAP1与线粒体功能和氧化应激的关系
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The Power of Yeast in Modelling Human Nuclear Mutations Associated with Mitochondrial Diseases.酵母在模拟与线粒体疾病相关的人类核基因突变中的作用。
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