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一种自我复制的线性DNA。

A Self-Replicating Linear DNA.

作者信息

Liew Pei Sheng, Tan Tze Hao, Wong Yin Cheng, Sim Edmund Ui Hang, Lee Choon Weng, Narayanan Kumaran

机构信息

School of Science, Monash University Malaysia, Bandar Sunway, 47500 Selangor Darul Ehsan, Malaysia.

Faculty of Science, Kyushu University, Ito campus, Fukuoka 819-0395, Japan.

出版信息

ACS Synth Biol. 2020 Apr 17;9(4):804-813. doi: 10.1021/acssynbio.9b00478. Epub 2020 Mar 26.

DOI:10.1021/acssynbio.9b00478
PMID:32196315
Abstract

TelN and are a unique DNA linearization unit isolated from bacteriophage N15. While being transferable, the TelN cleaving-rejoining activities remained stable to function on in both bacterial and mammalian environments. However, TelN contribution in linear plasmid replication in mammalian cells remains unknown. Herein, we investigated the association of TelN in linear -containing DNA (-DNA) replication in mammalian cells. Additionally, the mammalian origin of replication () that is well-known to initiate the replication event of plasmid vectors was also studied. In doing so, we identified that both TelN and mammalian initiation sites were essential for the replication of linear -DNA, determined by using methylation sensitive DpnI/MboI digestion and polymerase chain reaction (PCR) amplification approaches. Furthermore, we engineered the linear -DNA to be able to retain in mammalian cells using S/MAR technology. The resulting S/MAR containing -DNA was robust for at least 15 days, with (1) continuous -DNA replication, (2) correct splicing of gene transcripts, and (3) stable exogenous gene expression that was statistically comparable to the endogenous gene expression level. Understanding the activities of TelN and in mammalian cells can potentially provide insights for adapting this simple DNA linearization unit in developing novel genetic engineering tools, especially to the eukaryotic telomere/telomerase study.

摘要

TelN和 是从噬菌体N15中分离出的独特DNA线性化单元。虽然具有可转移性,但TelN的切割-重新连接活性在细菌和哺乳动物环境中对 在功能上仍保持稳定。然而,TelN在哺乳动物细胞线性质粒复制中的作用仍不清楚。在此,我们研究了TelN与哺乳动物细胞中含线性 -DNA( -DNA)复制的关联。此外,还研究了众所周知能启动质粒载体复制事件的哺乳动物复制起点( )。通过使用甲基化敏感的DpnI/MboI消化和聚合酶链反应(PCR)扩增方法,我们确定TelN和哺乳动物起始位点对于线性 -DNA的复制都是必不可少的。此外,我们利用S/MAR技术对线性 -DNA进行改造,使其能够保留在哺乳动物细胞中。所得含S/MAR的 -DNA至少15天保持稳定,具有(1)连续的 -DNA复制,(2)基因转录本的正确剪接,以及(3)稳定的外源基因表达,其在统计学上与内源基因表达水平相当。了解TelN和 在哺乳动物细胞中的活性可能为在开发新型基因工程工具,特别是在真核端粒/端粒酶研究中应用这个简单的DNA线性化单元提供思路。 (注:原文中存在一些未明确的表述,如“TelN and ”“ ”“ ”等,翻译时保留了原文形式。)

相似文献

1
A Self-Replicating Linear DNA.一种自我复制的线性DNA。
ACS Synth Biol. 2020 Apr 17;9(4):804-813. doi: 10.1021/acssynbio.9b00478. Epub 2020 Mar 26.
2
Phage N15-Based Vectors for Gene Cloning and Expression in Bacteria and Mammalian Cells.基于噬菌体 N15 的载体在细菌和哺乳动物细胞中的基因克隆和表达。
ACS Synth Biol. 2023 Apr 21;12(4):909-921. doi: 10.1021/acssynbio.2c00580. Epub 2023 Apr 6.
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Phage N15 protelomerase resolves its tos recognition site into hairpin telomeres within mammalian cells.噬菌体N15端粒酶在哺乳动物细胞内将其tos识别位点解析为发夹状端粒。
Anal Biochem. 2019 Oct 15;583:113361. doi: 10.1016/j.ab.2019.113361. Epub 2019 Jul 12.
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The protelomerase of temperate Escherichia coli phage N15 has cleaving-joining activity.温和型大肠杆菌噬菌体N15的原端粒酶具有切割连接活性。
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Phage N15 telomere resolution. Target requirements for recognition and processing by the protelomerase.噬菌体N15端粒解析。原端粒酶识别和加工的靶标要求。
J Biol Chem. 2002 Mar 22;277(12):10410-9. doi: 10.1074/jbc.M111769200. Epub 2002 Jan 11.
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Linear closed mini DNA generated by the prokaryotic cleaving-joining enzyme TelN is functional in mammalian cells.由原核切割连接酶TelN产生的线性封闭微型DNA在哺乳动物细胞中具有功能。
J Mol Med (Berl). 2002 Oct;80(10):648-54. doi: 10.1007/s00109-002-0362-2. Epub 2002 Aug 28.
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Bidirectional replication from an internal ori site of the linear N15 plasmid prophage.来自线性N15质粒原噬菌体内部ori位点的双向复制。
Nucleic Acids Res. 2003 Nov 15;31(22):6552-60. doi: 10.1093/nar/gkg856.
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The protelomerase of the phage-plasmid N15 is responsible for its maintenance in linear form.噬菌体质粒N15的端粒酶负责将其维持在线性形式。
J Mol Biol. 2001 Oct 5;312(5):899-906. doi: 10.1006/jmbi.2001.5019.
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Conversion of linear DNA with hairpin telomeres into a circular molecule in the course of phage N15 lytic replication.在噬菌体N15裂解复制过程中,带有发夹端粒的线性DNA转化为环状分子。
J Mol Biol. 2009 Aug 14;391(2):261-8. doi: 10.1016/j.jmb.2009.06.021. Epub 2009 Jun 10.
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Crude protein extraction protocol for phage N15 protelomerase in vitro enzymatic assays.用于体外酶促分析的噬菌体 N15 端酶粗蛋白提取方案。
Anal Biochem. 2011 Jul 1;414(1):169-71. doi: 10.1016/j.ab.2011.03.006. Epub 2011 Mar 10.

引用本文的文献

1
Telomere bacteriophages are widespread and equip their bacterial hosts with potent interbacterial weapons.端粒噬菌体分布广泛,并为其细菌宿主配备了强大的细菌间武器。
Sci Adv. 2025 May 2;11(18):eadt1627. doi: 10.1126/sciadv.adt1627. Epub 2025 Apr 30.
2
The TelN/tos-assisted precise targeting of chromosome segments (TAPE).TelN/tos 辅助的染色体片段精确靶向(TAPE)。
J Adv Res. 2022 Nov;41:169-177. doi: 10.1016/j.jare.2022.01.017. Epub 2022 Feb 3.