Harris Christopher J, Davis Brett A, Zweig Jonathan A, Nevonen Kimberly A, Quinn Joseph F, Carbone Lucia, Gray Nora E
Department of Neurology, Oregon Health and Science University, Portland, OR, United States.
Department of Medicine, KCVI, Oregon Health and Science University, Portland, OR, United States.
Front Genet. 2020 Mar 6;11:111. doi: 10.3389/fgene.2020.00111. eCollection 2020.
As the population ages, interest in identifying biomarkers of healthy aging and developing antiaging interventions has increased. DNA methylation has emerged as a potentially powerful molecular marker of aging. Methylation changes at specific sites in the human genome that have been identified in peripheral blood have been used as robust estimators of chronological age. Similar age-related DNA methylation signatures are also seen in various tissue types in rodents. However, whether these peripheral alterations in methylation status reflect changes that also occur in the central nervous system remains unknown. This study begins to address this issue by identifying age-related methylation patterns in the hippocampus and blood of young and old mice. Reduced-representation bisulfite sequencing (RBSS) was used to identify differentially methylated regions (DMRs) in the blood and hippocampus of 2- and 20-month-old C57/Bl6 mice. Of the thousands of DMRs identified genome-wide only five were both found in gene promoters and significantly changed in the same direction with age in both tissues. We analyzed the hippocampal expression of these five hypermethylated genes and found that three were expressed at significantly lower levels in aged mice [suppressor of fused homolog (), nitric oxide synthase 1 () and tripartite motif containing 2 ()]. We also identified several transcription factor binding motifs common to both hippocampus and blood that were enriched in the DMRs. Overall, our findings suggest that some age-related methylation changes that occur in the brain are also evident in the blood and could have significant translational relevance.
随着人口老龄化,人们对识别健康衰老的生物标志物以及开发抗衰老干预措施的兴趣日益增加。DNA甲基化已成为一种潜在的强大衰老分子标志物。在人类基因组特定位点发生的甲基化变化已在外周血中得到确认,并被用作实际年龄的可靠估计指标。在啮齿动物的各种组织类型中也观察到了类似的与年龄相关的DNA甲基化特征。然而,这些外周甲基化状态的改变是否反映了中枢神经系统中也发生的变化仍不清楚。本研究通过识别年轻和老年小鼠海马体和血液中与年龄相关的甲基化模式来着手解决这一问题。采用简化代表性亚硫酸氢盐测序(RBSS)技术,在2月龄和20月龄C57/Bl6小鼠的血液和海马体中识别差异甲基化区域(DMR)。在全基因组中鉴定出的数千个DMR中,只有五个同时存在于基因启动子中,并且在两个组织中都随着年龄的增长而朝着相同方向发生显著变化。我们分析了这五个高甲基化基因在海马体中的表达情况,发现其中三个在老年小鼠中的表达水平显著降低[融合抑制同源物()、一氧化氮合酶1()和含三联体基序2()]。我们还在海马体和血液中共同鉴定出了几个富含在DMR中的转录因子结合基序。总体而言,我们的研究结果表明,大脑中发生的一些与年龄相关的甲基化变化在外周血中也很明显,并且可能具有重要的转化意义。