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ANGPT2 相关结直肠癌的分子描述。

Molecular description of ANGPT2 associated colorectal carcinoma.

机构信息

INSERM, EFS BFC, UMR1098, RIGHT, University of Bourgogne Franche-Comté, Interactions Greffon-Hôte-Tumeur/Ingénierie Cellulaireet Génique, Besançon, France.

Department of Medical Oncology, University Hospital of Besançon, Besançon, France.

出版信息

Int J Cancer. 2020 Oct 1;147(7):2007-2018. doi: 10.1002/ijc.32993. Epub 2020 May 22.

Abstract

Angiopoietin-2 (ANGPT2) is a prognostic factor in metastatic colorectal cancer (CRC). Nevertheless, it remains to be elucidated which molecular characteristics make up the ANGPT2-related poor-prognosis CRC subset. Public transcriptomic datasets were collected from Gene Expression Omnibus GEO and with the TCGAbiolinks R-package for the TCGA. After appropriate normalization, differential expression analysis was performed using Benjamini and Hochberg method for false discovery rate. Plasma from two prospective clinical trials were used to investigate the clinical impact of ANGPT2-related biomarkers. In the 935 samples included in four annotated platforms (GPL) and derived from localized CRC, ANGPT2 expression conferred a worst overall survival (HR = 1.20; p = 0.02). CRC stage, ANGPT2 expression but not Consortium Molecular Subtype (CMS) predict overall survival in multivariate analysis. ANGPT2 expression was not correlated with a specific CMS nor to RAS, RAF, MSI, p53, CIN, CIMP genomic alterations. Gene expression analysis revealed that ANGPT2 CRC subset is characterized by angiogenesis-related gene expression, presence of myeloid cells, stromal organization and resistance to chemotherapy. A prognostic model was proposed using seric levels of ANGPT2, STC1 and CD138 in 97 mCRC patients. Our results provide evidence that ANGPT2 is a prognostic factor in localized CRC and defined a specific CRC subset with potential clinical implementation.

摘要

血管生成素 2 (ANGPT2) 是转移性结直肠癌 (CRC) 的预后因素。然而,ANGPT2 相关的 CRC 预后不良亚组的分子特征仍有待阐明。从基因表达综合数据库 (GEO) 和 TCGAbiolinks R 包中收集了公共转录组数据集,用于 TCGA。经过适当的归一化后,使用 Benjamini 和 Hochberg 方法进行差异表达分析,以校正假发现率。使用来自两个前瞻性临床试验的血浆来研究 ANGPT2 相关生物标志物的临床影响。在四个注释平台 (GPL) 中包含的 935 个样本和源自局部 CRC 的样本中,ANGPT2 的表达导致总体生存最差(HR = 1.20;p = 0.02)。在多变量分析中,CRC 分期、ANGPT2 的表达而不是联合分子亚型 (CMS) 预测总体生存。ANGPT2 的表达与特定的 CMS 或 RAS、RAF、MSI、p53、CIN、CIMP 基因组改变均不相关。基因表达分析表明,ANGPT2 CRC 亚组的特征是与血管生成相关的基因表达、髓样细胞的存在、基质组织和对化疗的耐药性。在 97 名 mCRC 患者中,使用血清水平的 ANGPT2、STC1 和 CD138 提出了一种预后模型。我们的研究结果提供了证据,表明 ANGPT2 是局部 CRC 的预后因素,并定义了具有潜在临床应用的特定 CRC 亚组。

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