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三角铲叶螽(直翅目,螽斯科,鸣螽亚科)的线粒体基因组比较及雌性标本的首次描述

Comparative mitochondrial genomics of Shoveliteratura triangula (Orthoptera, Tettigoniidae, Meconematinae) and the first description of a female specimen.

作者信息

Mao Shaoli, Yuan Hao, Chang Huihui, Shi Fuming, Zhou Yafu

机构信息

Xi'an Botanical Garden of Shaanxi Province/Institute of Botany of Shaanxi Province, Xi'an, Shaanxi, China Shaanxi Engineering Research Centre for Conservation and Utilization of Botanical Resources, Xi'an, Shaanxi, China.

出版信息

Zootaxa. 2020 Mar 18;4751(3):zootaxa.4751.3.5. doi: 10.11646/zootaxa.4751.3.5.

Abstract

This paper provides the first description of a female of Shoveliteratura triangula Shi, Bian Change, 2011, as well as the complete mitogenome sequence using next-generation sequencing (NGS) technology. The length of the entire mitogenome was 16,152 bp and contained the typical gene arrangement, base composition, and codon usage found in other related species. The overall base composition exhibited a clear anti-G (10.8%) and AT bias (70.5%). The third codon positions in all protein-coding genes (PCGs) displayed high AT-content values (81.4%) in contrast to lower values of 64.2%/64.5% in the first/second positions. Two tandem repeats, 2.49 repeats of 112 bp and 3.65 repeats of 201 bp, contributed 1013 bp to the length of the S. triangula control region (CR). A T-stretch as a recognition sequence of the replication origin and more than one distinct tandem repeat in the CR were common in the Tettigoniidae mitogenomes. Both the maximum likelihood (ML) and Bayesian inference (BI) analyses supported each subfamily of the Tettigoniidae as a monophyletic group. The relationships of the subfamilies were as follows: (Lipotactinae (Hexacentrinae (Conocephalinae (Meconematinae (Bradyporinae, Tettigoniinae))))). The newly sequenced species S. triangula was most closely related to Pseudokuzicus pieli.

摘要

本文首次描述了三角铲颚螽Shoveliteratura triangula Shi, Bian & Change, 2011的雌性个体,并利用新一代测序(NGS)技术获得了其完整的线粒体基因组序列。整个线粒体基因组长度为16,152 bp,具有与其他相关物种相同的典型基因排列、碱基组成和密码子使用情况。总体碱基组成表现出明显的反G(10.8%)和AT偏好(70.5%)。所有蛋白质编码基因(PCGs)的第三密码子位置显示出较高的AT含量值(81.4%),而第一/第二密码子位置的AT含量值较低,分别为64.2%/64.5%。两个串联重复序列,112 bp的2.49次重复和201 bp的3.65次重复,使三角铲颚螽控制区(CR)的长度增加了1013 bp。作为复制起点识别序列的T-序列以及CR中不止一个不同的串联重复序列在螽斯科线粒体基因组中很常见。最大似然法(ML)和贝叶斯推断(BI)分析均支持螽斯科的每个亚科为单系类群。亚科之间的关系如下:(脂螽亚科(六刺螽亚科(草螽亚科(鸣螽亚科(缓步螽亚科、螽斯亚科)))))。新测序的三角铲颚螽物种与皮氏拟库螽关系最为密切。

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