Department of Digestive Surgery, Breast and Thyroid Surgery, Graduate School of Medical and Dental Sciences, Kagoshima University, Kagoshima, Japan.
Department of Functional Genomics, Chiba University Graduate School of Medicine, Chiba, Japan.
J Hum Genet. 2020 Aug;65(8):647-656. doi: 10.1038/s10038-020-0746-6. Epub 2020 Mar 31.
RNA-sequencing-based microRNA (miRNA) expression signatures have revealed that miR-148a-5p (the passenger strand of the miR-148a-duplex) is downregulated in various kinds of cancer tissues. Analysis of The Cancer Genome Atlas (TCGA) database showed that low expression of miR-148a-5p was predictive of a lower survival rate (p = 0.041) in patients with gastric cancer (GC). Downregulation of miR-148a-5p was confirmed in GC clinical specimens, and its ectopic expression attenuated GC cell proliferation. Our search for miRNA target genes identified a total of 18 oncogenic targets of miR-148a-5p in GC cells. Among these targets, high expression levels of six genes (THBS2, P4HA3, SERPINH1, CDH11, BCAT1, and KCNG3) were closely associated with a poor prognosis (10-year survival rates) in GC patients (p < 0.05) according to TCGA database analyses. Furthermore, we focused on SERPINH1 as a chaperone protein involved in collagen folding in humans. Aberrant expression of SERPINH1 (mRNA and protein levels) was confirmed in GC clinical specimens. Knockdown assays of SERPINH1 using siRNAs resulted in inhibition of the aggressive phenotype of GC cells. Exploring the molecular networks controlled by miRNAs (including miRNA passenger strands) will broaden our understanding of the molecular pathogenesis of GC.
基于 RNA 测序的 microRNA (miRNA) 表达谱分析表明,miR-148a-5p(miR-148a 双链体的过客链)在各种癌症组织中下调。对癌症基因组图谱 (TCGA) 数据库的分析表明,胃癌 (GC) 患者 miR-148a-5p 低表达预示着生存率降低(p=0.041)。GC 临床标本中证实 miR-148a-5p 下调,其异位表达可减弱 GC 细胞增殖。我们搜索 miRNA 靶基因,在 GC 细胞中鉴定出 miR-148a-5p 的总共 18 个致癌靶基因。在这些靶基因中,根据 TCGA 数据库分析,六种基因(THBS2、P4HA3、SERPINH1、CDH11、BCAT1 和 KCNG3)的高表达水平与 GC 患者预后不良(10 年生存率)密切相关(p<0.05)。此外,我们将 SERPINH1 作为一种参与人类胶原折叠的伴侣蛋白作为研究重点。GC 临床标本中证实 SERPINH1(mRNA 和蛋白水平)表达异常。使用 siRNA 对 SERPINH1 进行敲低实验导致 GC 细胞侵袭表型受到抑制。探索受 miRNA(包括 miRNA 过客链)调控的分子网络将拓宽我们对 GC 分子发病机制的理解。