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pRC12 和 pRC18 两种θ复制型质粒的核苷酸序列及其分析,它们被乳酸乳球菌 CRL 705 所携带。

Nucleotide sequence and analysis of pRC12 and pRC18, two theta-replicating plasmids harbored by Lactobacillus curvatus CRL 705.

机构信息

Centro de Referencia para Lactobacilos (CERELA)-CONICET, Tucumán, Argentina.

Planta Piloto de Procesos Industriales Microbiológicos (PROIMI)-CONICET, Tucumán, Argentina.

出版信息

PLoS One. 2020 Apr 2;15(4):e0230857. doi: 10.1371/journal.pone.0230857. eCollection 2020.

DOI:10.1371/journal.pone.0230857
PMID:32240216
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7117683/
Abstract

The nucleotide sequences of plasmids pRC12 (12,342 bp; GC 43.99%) and pRC18 (18,664 bp; GC 34.33%), harbored by the bacteriocin-producer Lactobacillus curvatus CRL 705, were determined and analyzed. Plasmids pRC12 and pRC18 share a region with high DNA identity (> 83% identity between RepA, a Type II toxin-antitoxin system and a tyrosine integrase genes) and are stably maintained in their natural host L. curvatus CRL 705. Both plasmids are low copy number and belong to the theta-type replicating group. While pRC12 is a pUCL287-like plasmid that possesses iterons and the repA and repB genes for replication, pRC18 harbors a 168 amino acid replication protein affiliated to RepB, which was named RepB'. Plasmid pRC18 also possesses a pUCL287-like repA gene but it was disrupted by an 11 kb insertion element that contains RepB', several transposases/IS elements, and the lactocin Lac705 operon. An Escherichia coli / Lactobacillus shuttle vector, named plasmid p3B1, carrying the pRC18 replicon (i.e. repB' and replication origin), a chloramphenicol resistance gene and a pBluescript backbone, was constructed and used to define the host range of RepB'. Chloramphenicol-resistant transformants were obtained after electroporation of Lactobacillus plantarum CRL 691, Lactobacillus sakei 23K and a plasmid-cured derivative of L. curvatus CRL 705, but not of L. curvatus DSM 20019 or Lactococcus lactis NZ9000. Depending on the host, transformation efficiency ranged from 102 to 107 per μg of DNA; in the new hosts, the plasmid was relatively stable as 29-53% of recombinants kept it after cell growth for 100 generations in the absence of selective pressure. Plasmid p3B1 could therefore be used for cloning and functional studies in several Lactobacillus species.

摘要

由细菌素产生菌乳杆菌 CRL 705 携带的质粒 pRC12(12342bp;GC 含量 43.99%)和 pRC18(18664bp;GC 含量 34.33%)的核苷酸序列已被确定和分析。质粒 pRC12 和 pRC18 共享一个具有高度 DNA 同一性的区域(RepA 之间的同一性>83%,RepA 是一种 II 型毒素-抗毒素系统和酪氨酸整合酶基因),并在其天然宿主乳杆菌 CRL 705 中稳定维持。这两个质粒都是低拷贝数的,属于θ型复制群。虽然 pRC12 是一个类似于 pUCL287 的质粒,拥有复制所必需的 iterons 和 repA 和 repB 基因,但 pRC18 却携带一个 168 个氨基酸的复制蛋白,该蛋白与 RepB 相关,被命名为 RepB'。质粒 pRC18 还拥有一个类似于 pUCL287 的 repA 基因,但它被一个 11kb 的插入元件所破坏,该元件包含 RepB'、几个转座酶/IS 元件和乳菌素 Lac705 操纵子。一个大肠杆菌/乳杆菌穿梭载体,命名为质粒 p3B1,携带 pRC18 复制子(即 repB'和复制起点)、氯霉素抗性基因和 pBluescript 骨架,被构建并用于定义 RepB'的宿主范围。在电穿孔转化植物乳杆菌 CRL 691、乳杆菌 sakei 23K 和乳杆菌 CRL 705 的质粒消除衍生株后,获得了氯霉素抗性转化体,但在乳杆菌 DSM 20019 或乳球菌 lactis NZ9000 中则没有。根据宿主的不同,转化效率从每微克 DNA 102 到 107 不等;在新宿主中,该质粒相对稳定,在没有选择压力的情况下,100 代细胞生长后,29-53%的重组子仍保留该质粒。因此,质粒 p3B1 可用于在几种乳杆菌中进行克隆和功能研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4009/7117683/11daf6f2d585/pone.0230857.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4009/7117683/8f8d45bf3174/pone.0230857.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4009/7117683/3ea1a9c55307/pone.0230857.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4009/7117683/698bf8cdbea5/pone.0230857.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4009/7117683/2f5e76cabfcb/pone.0230857.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4009/7117683/84a4967a04af/pone.0230857.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4009/7117683/11daf6f2d585/pone.0230857.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4009/7117683/8f8d45bf3174/pone.0230857.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4009/7117683/3ea1a9c55307/pone.0230857.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4009/7117683/698bf8cdbea5/pone.0230857.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4009/7117683/2f5e76cabfcb/pone.0230857.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4009/7117683/84a4967a04af/pone.0230857.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4009/7117683/11daf6f2d585/pone.0230857.g006.jpg

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