Urick Mary Ellen, Bell Daphne W
Cancer Genetics and Comparative Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA.
Cancer Med. 2020 Jun;9(11):3863-3874. doi: 10.1002/cam4.3013. Epub 2020 Apr 5.
Despite advancements over the past decade revealing molecular aberrations characteristic of endometrial cancer (EC) subtypes, serous ECs remain difficult to treat and associated with poor outcomes. This is due, in part, to the rarity of these tumors within clinical trials and the inability to directly target the most frequent genomic abnormalities. One of the most commonly somatically mutated genes in serous ECs is the tumor suppressor F-box and WD repeat domain containing 7 (FBXW7).
To identify changes in protein expression associated with FBXW7 mutation, we clustered regularly interspaced short palindromic repeats (CRISPR)-edited ARK4 FBXW7 nonmutant serous EC cells to insert recurrent FBXW7 mutations. We then compared the liquid chromatography tandem mass spectrometry-based proteomic profiles of CRISPR-edited ARK1 and ARK4 serous EC cells to matched parental cells.
Among distinct total and phosphorylated proteins that were significantly differentially expressed in FBXW7-mutant cell lines compared to matched parental lines, we identified increased PADI2 (peptidyl arginine deiminase 2) expression in all ARK1 and ARK4 CRISPR-edited FBXW7-mutant cell lines. We further confirmed the correlation between FBXW7 mutation and increased PADI2 expression in a third biological background, JHUEM-1 endometrioid EC cells. Finally, we established that PADI2 protein is expressed in primary serous endometrial tumors.
Our findings provide novel insight into proteomic changes associated with FBXW7 mutation in serous ECs and identify PADI2 as a novel potential therapeutic target for these tumors.
尽管在过去十年取得了进展,揭示了子宫内膜癌(EC)亚型的分子异常,但浆液性ECs仍然难以治疗且预后较差。部分原因在于这些肿瘤在临床试验中罕见,并且无法直接靶向最常见的基因组异常。浆液性ECs中最常见的体细胞突变基因之一是肿瘤抑制因子含F盒和WD重复结构域7(FBXW7)。
为了确定与FBXW7突变相关的蛋白质表达变化,我们对规律成簇间隔短回文重复序列(CRISPR)编辑的ARK4 FBXW7非突变浆液性EC细胞进行聚类,以插入复发性FBXW7突变。然后,我们将基于液相色谱串联质谱的CRISPR编辑的ARK1和ARK4浆液性EC细胞的蛋白质组学谱与匹配的亲本细胞进行比较。
与匹配的亲代细胞系相比,在FBXW7突变细胞系中显著差异表达的不同总蛋白和磷酸化蛋白中,我们在所有ARK1和ARK4 CRISPR编辑的FBXW7突变细胞系中发现肽基精氨酸脱亚氨酶2(PADI2)表达增加。我们在第三种生物学背景JHUEM-1子宫内膜样EC细胞中进一步证实了FBXW7突变与PADI2表达增加之间的相关性。最后,我们确定PADI2蛋白在原发性浆液性子宫内膜肿瘤中表达。
我们的研究结果为浆液性ECs中与FBXW7突变相关的蛋白质组学变化提供了新的见解,并确定PADI2是这些肿瘤的一个新的潜在治疗靶点。