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人O-磷酸乙醇胺磷酸裂解酶的结构表征

Structural characterization of human O-phosphoethanolamine phospho-lyase.

作者信息

Vettraino Chiara, Peracchi Alessio, Donini Stefano, Parisini Emilio

机构信息

Center for Nano Science and Technology @PoliMi, Istituto Italiano di Tecnologia, Via Pascoli 70/3, 20133 Milano, Italy.

Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, 43124 Parma, Italy.

出版信息

Acta Crystallogr F Struct Biol Commun. 2020 Apr 1;76(Pt 4):160-167. doi: 10.1107/S2053230X20002988.

Abstract

Human O-phosphoethanolamine phospho-lyase (hEtnppl; EC 4.2.3.2) is a pyridoxal 5'-phosphate-dependent enzyme that catalyzes the degradation of O-phosphoethanolamine (PEA) into acetaldehyde, phosphate and ammonia. Physiologically, the enzyme is involved in phospholipid metabolism, as PEA is the precursor of phosphatidylethanolamine in the CDP-ethanolamine (Kennedy) pathway. Here, the crystal structure of hEtnppl in complex with pyridoxamine 5'-phosphate was determined at 2.05 Å resolution by molecular replacement using the structure of A1RDF1 from Arthrobacter aurescens TC1 (PDB entry 5g4i) as the search model. Structural analysis reveals that the two proteins share the same general fold and a similar arrangement of active-site residues. These results provide novel and useful information for the complete characterization of the human enzyme.

摘要

人O-磷酸乙醇胺磷酸裂解酶(hEtnppl;EC 4.2.3.2)是一种依赖磷酸吡哆醛的酶,可催化O-磷酸乙醇胺(PEA)降解为乙醛、磷酸和氨。在生理上,该酶参与磷脂代谢,因为PEA是CDP-乙醇胺(肯尼迪)途径中磷脂酰乙醇胺的前体。在此,通过分子置换,以金色节杆菌TC1的A1RDF1结构(PDB条目5g4i)作为搜索模型,在2.05 Å分辨率下确定了与磷酸吡哆胺复合的hEtnppl的晶体结构。结构分析表明,这两种蛋白质具有相同的总体折叠和活性位点残基的相似排列。这些结果为全面表征人源酶提供了新颖且有用的信息。

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