State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University , Guangzhou, China.
Ophthalmic Genet. 2020 Jun;41(3):279-283. doi: 10.1080/13816810.2020.1747085. Epub 2020 Apr 9.
Biallelic mutations in neuraminidase 1 () are associated with cherry-red spots. Whole genome sequencing contributes to eliminating pseudo-homozygous mutations when large-scale deletion of one allele in and other genes occurs.
Bilateral cherry-red spots in the macula were the only detectable sign in an 11-year-old girl with reduced visual acuity over the last two years. Targeted exome sequencing of genes for inherited eye diseases identified a homozygous c.544A>G (p.Ser182Gly) variation in the gene. This variant was also present in her mother in the heterozygous state but not in her father. Whole genome sequencing identified a heterozygous 27.5 kb deletion involving the whole coding exons of in her father. Sanger sequencing disclosed the breakpoint of the deletion. This heterozygous deletion was also detected in the patient, so the c.544A>G mutation should be heterozygous in the patient.
The results of this case remind us of the limitations of routine exome sequencing and the need to perform segregation studies and deletion/duplication analysis or WGS if parental studies do not support exome findings. In addition, patients with sialidosis may present with ocular manifestations without systemic signs early in the disease course.
神经氨酸酶 1 () 的双等位基因突变与樱桃红斑点有关。当 和其他基因的一个等位基因发生大片段缺失时,全基因组测序有助于消除假纯合突变。
一名 11 岁女孩的双眼黄斑区出现双侧樱桃红斑点,是过去两年视力逐渐下降的唯一可检测到的体征。遗传性眼病基因靶向外显子组测序发现, 基因中的 c.544A>G (p.Ser182Gly) 杂合变异。其母亲也以杂合状态携带该变异,但父亲未携带。全基因组测序发现父亲存在涉及 整个编码外显子的 27.5 kb 缺失杂合子。Sanger 测序揭示了缺失的断点。该杂合缺失也在患者中检测到,因此 c.544A>G 突变在患者中应为杂合子。
本病例结果提醒我们,常规外显子组测序存在局限性,如果父母研究不支持外显子组结果,需要进行分离研究和缺失/重复分析或全基因组测序。此外,唾液酸贮积症患者在疾病早期可能仅出现眼部表现,而无全身体征。