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龟类对爬行类核型进化及性别决定基因组结构的启示

Turtle Insights into the Evolution of the Reptilian Karyotype and the Genomic Architecture of Sex Determination.

作者信息

Bista Basanta, Valenzuela Nicole

机构信息

Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50011, USA.

出版信息

Genes (Basel). 2020 Apr 11;11(4):416. doi: 10.3390/genes11040416.

Abstract

Sex chromosome evolution remains an evolutionary puzzle despite its importance in understanding sexual development and genome evolution. The seemingly random distribution of sex-determining systems in reptiles offers a unique opportunity to study sex chromosome evolution not afforded by mammals or birds. These reptilian systems derive from multiple transitions in sex determination, some independent, some convergent, that lead to the birth and death of sex chromosomes in various lineages. Here we focus on turtles, an emerging model group with growing genomic resources. We review karyotypic changes that accompanied the evolution of chromosomal systems of genotypic sex determination (GSD) in chelonians from systems under the control of environmental temperature (TSD). These transitions gave rise to 31 GSD species identified thus far (out of 101 turtles with known sex determination), 27 with a characterized sex chromosome system (13 of those karyotypically). These sex chromosomes are varied in terms of the ancestral autosome they co-opted and thus in their homology, as well as in their size (some are macro-, some are micro-chromosomes), heterogamety (some are XX/XY, some ZZ/ZW), dimorphism (some are virtually homomorphic, some heteromorphic with larger-X, larger W, or smaller-Y), age (the oldest system could be ~195 My old and the youngest < 25 My old). Combined, all data indicate that turtles follow some tenets of classic theoretical models of sex chromosome evolution while countering others. Finally, although the study of dosage compensation and molecular divergence of turtle sex chromosomes has lagged behind research on other aspects of their evolution, this gap is rapidly decreasing with the acceleration of ongoing research and growing genomic resources in this group.

摘要

尽管性染色体进化在理解性别发育和基因组进化方面具有重要意义,但它仍然是一个进化难题。爬行动物性决定系统看似随机的分布提供了一个独特的机会,来研究哺乳动物或鸟类所没有的性染色体进化。这些爬行动物的系统源自性决定的多次转变,有些是独立的,有些是趋同的,这些转变导致了不同谱系中性染色体的产生和消亡。在这里,我们聚焦于龟类,这是一个新兴的模型类群,其基因组资源不断增加。我们回顾了龟类中基因型性别决定(GSD)染色体系统从环境温度决定(TSD)系统进化过程中伴随的核型变化。这些转变产生了迄今为止已确定的31个GSD物种(在已知性别决定的101种龟类中),其中27种具有特征性的性染色体系统(其中13种有核型特征)。这些性染色体在它们所选用的祖先常染色体方面各不相同,因此在同源性方面也不同,在大小上也不同(有些是大染色体,有些是小染色体),在异配性别方面也不同(有些是XX/XY,有些是ZZ/ZW),在二态性方面也不同(有些几乎是同态的,有些是异形的,有较大的X、较大的W或较小的Y),在年龄方面也不同(最古老的系统可能有1.95亿年历史,最年轻的不到2500万年历史)。综合来看,所有数据表明龟类遵循了性染色体进化经典理论模型的一些原则,同时也与其他原则相悖。最后,尽管龟类性染色体的剂量补偿和分子分化研究落后于其进化其他方面的研究,但随着该类群研究的加速和基因组资源的增加,这一差距正在迅速缩小。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ab8d/7231036/12f1dfb000cf/genes-11-00416-g001.jpg

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