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矩阵分解在多发性硬化症中建模病变发展过程。

Matrix decomposition for modeling lesion development processes in multiple sclerosis.

机构信息

Department of Biostatistics, Brown University, Providence, RI 02903, USA.

Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health, Baltimore, MD 21205, USA.

出版信息

Biostatistics. 2022 Jan 13;23(1):83-100. doi: 10.1093/biostatistics/kxaa016.

DOI:10.1093/biostatistics/kxaa016
PMID:32318692
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9118558/
Abstract

Our main goal is to study and quantify the evolution of multiple sclerosis lesions observed longitudinally over many years in multi-sequence structural magnetic resonance imaging (sMRI). To achieve that, we propose a class of functional models for capturing the temporal dynamics and spatial distribution of the voxel-specific intensity trajectories in all sMRI sequences. To accommodate the hierarchical data structure (observations nested within voxels, which are nested within lesions, which, in turn, are nested within study participants), we use structured functional principal component analysis. We propose and evaluate the finite sample properties of hypothesis tests of therapeutic intervention effects on lesion evolution while accounting for the multilevel structure of the data. Using this novel testing strategy, we found statistically significant differences in lesion evolution between treatment groups.

摘要

我们的主要目标是研究和量化在多年的多序列结构磁共振成像(sMRI)中观察到的多发性硬化病变的演变。为此,我们提出了一类功能模型,用于捕捉所有 sMRI 序列中体素特定强度轨迹的时间动态和空间分布。为了适应分层数据结构(观察值嵌套在体素内,体素嵌套在病变内,病变又嵌套在研究参与者内),我们使用结构功能主成分分析。我们提出并评估了在考虑数据多层次结构的情况下,治疗干预对病变演变影响的假设检验的有限样本性质。使用这种新的测试策略,我们发现治疗组之间的病变演变存在统计学上的显著差异。

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Matrix decomposition for modeling lesion development processes in multiple sclerosis.矩阵分解在多发性硬化症中建模病变发展过程。
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本文引用的文献

1
PREVAIL: Predicting Recovery through Estimation and Visualization of Active and Incident Lesions.PREVAIL:通过对活动性和新发病变的评估与可视化来预测恢复情况。
Neuroimage Clin. 2016 Aug 2;12:293-9. doi: 10.1016/j.nicl.2016.07.015. eCollection 2016.
2
Relating multi-sequence longitudinal intensity profiles and clinical covariates in incident multiple sclerosis lesions.关联新发多发性硬化病变中的多序列纵向强度曲线与临床协变量。
Neuroimage Clin. 2015 Nov 11;10:1-17. doi: 10.1016/j.nicl.2015.10.013. eCollection 2016.
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Wavelet-Based Scalar-on-Function Finite Mixture Regression Models.基于小波的函数标量有限混合回归模型
Comput Stat Data Anal. 2016 Jan 1;93:86-96. doi: 10.1016/j.csda.2014.11.017. Epub 2014 Dec 17.
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Significance tests for functional data with complex dependence structure.具有复杂相依结构的函数型数据的显著性检验。
J Stat Plan Inference. 2015 Jan;156:1-13. doi: 10.1016/j.jspi.2014.08.006.
5
Multilevel Functional Principal Component Analysis for High-Dimensional Data.高维数据的多级功能主成分分析
J Comput Graph Stat. 2011;20(4):852-873. doi: 10.1198/jcgs.2011.10122.
6
Longitudinal High-Dimensional Principal Components Analysis with Application to Diffusion Tensor Imaging of Multiple Sclerosis.纵向高维主成分分析及其在多发性硬化症扩散张量成像中的应用
Ann Appl Stat. 2014;8(4):2175-2202. doi: 10.1214/14-aoas748.
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Quantitative Measurement of tissue damage and recovery within new T2w lesions in pediatric- and adult-onset multiple sclerosis.定量测量新 T2w 病变内儿科和成人发病多发性硬化症的组织损伤和恢复。
Mult Scler. 2015 May;21(6):718-25. doi: 10.1177/1352458514551594. Epub 2014 Dec 5.
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Statistical normalization techniques for magnetic resonance imaging.用于磁共振成像的统计归一化技术。
Neuroimage Clin. 2014 Aug 15;6:9-19. doi: 10.1016/j.nicl.2014.08.008. eCollection 2014.
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Structured functional principal component analysis.结构化功能主成分分析
Biometrics. 2015 Mar;71(1):247-257. doi: 10.1111/biom.12236. Epub 2014 Oct 18.
10
Large Covariance Estimation by Thresholding Principal Orthogonal Complements.通过阈值化主正交补进行大协方差估计
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