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药物发现中的事实、模式和原则:用实测物理化学数据评价 5 规则。

Facts, Patterns, and Principles in Drug Discovery: Appraising the Rule of 5 with Measured Physicochemical Data.

机构信息

Medicinal Sciences and Technology, GlaxoSmithKline, Gunnels Wood Road, Stevenage, Hertfordshire SG1 2NY, U.K.

Blue Burgundy Ltd., Bedford, Bedfordshire MK45 2AD, U.K.

出版信息

J Med Chem. 2020 Sep 24;63(18):10091-10108. doi: 10.1021/acs.jmedchem.9b01596. Epub 2020 May 11.

Abstract

The rule of 5 was designed to estimate the likelihood of poor absorption or permeation, noting the impact of poor solubility. This Perspective explores the impact of various physicochemical descriptors and contemporary lipophilicity measurements on permeability and solubility, showing that the distribution coefficient log  (rather than log ) is the most impactful parameter. Molecular weight, almost invariably the defining characteristic of "beyond the rule of 5" compounds, has little impact on solubility when log  measurements and aromaticity are considered. Predicting permeation is more complex, given passive and carrier transport mechanisms; however, notable patterns of behavior are apparent, giving insight even "beyond the rule of 5". Recommended best practices should involve using the facts (measurements) and the patterns they reveal to establish informative principles rather than fastidious rules.

摘要

5 规则旨在估计不良吸收或渗透的可能性,并注意到不良溶解度的影响。本观点探讨了各种物理化学描述符和当代亲脂性测量对渗透性和溶解度的影响,表明分配系数 log(而非 log)是最具影响力的参数。分子量几乎始终是“超出 5 规则”化合物的定义特征,但当考虑 log 测量和芳香性时,对溶解度的影响很小。由于存在被动和载体转运机制,预测渗透更为复杂;然而,明显的行为模式是显而易见的,即使“超出 5 规则”也能提供深入的见解。建议的最佳实践应该包括使用事实(测量)和它们揭示的模式来建立信息丰富的原则,而不是繁琐的规则。

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