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光谱法与能量计算法联用测定溶液中肽的构象

Combined use of spectroscopic and energy calculation methods for the determination of peptide conformation in solution.

作者信息

Nikiforovich G V, Vesterman B G, Betins J

机构信息

Institute of Organic Synthesis, Latvian S.S.R. Academy of Sciences, Aizkraukles, U.S.S.R.

出版信息

Biophys Chem. 1988 Aug;31(1-2):101-6. doi: 10.1016/0301-4622(88)80013-9.

Abstract

This paper describes the combined use of energy calculations and spectroscopic data for the determination of peptide conformations in solution. The approach involves (i) experimental measurements of spectroscopic parameters for a molecule, (ii) calculation of these parameters for low-energy conformers previously determined with regard to local fluctuations in conformation and (iii) a random search for statistically weighted combinations of conformers which provide a good agreement between the calculated and experimental data. The above approach was used to study the conformation of a spin-labelled angiotensin molecule (SL-AT). It appears that the C-terminal hexapeptide of SL-AT possesses two geometrically different spatial forms of the backbone in aqueous solution, with mean values for the statistical weight of 0.78 and 0.22, respectively. In contrast, the N-terminal part of the molecule is conformationally labile. The data obtained can be used to describe the conformation of angiotensin in solution.

摘要

本文描述了结合能量计算和光谱数据来测定溶液中肽构象的方法。该方法包括:(i) 对分子的光谱参数进行实验测量;(ii) 针对先前根据构象局部波动确定的低能量构象异构体计算这些参数;(iii) 随机搜索构象异构体的统计加权组合,以使计算数据与实验数据之间达成良好的一致性。上述方法被用于研究自旋标记的血管紧张素分子(SL-AT)的构象。结果表明,SL-AT的C末端六肽在水溶液中具有两种几何结构不同的主链空间形式,其统计权重的平均值分别为0.78和0.22。相比之下,该分子的N末端部分构象不稳定。所获得的数据可用于描述血管紧张素在溶液中的构象。

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